RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 TBC1D23Q9NUY8 699 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.32□□□□□ -0.6
USP6NL-201ENST00000277575 PRKAG3Q9UGI9 489 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 AJAP1Q9UKB5 411 aaPredicted RBP11.32□□□□□ -0.6
USP6NL-201ENST00000277575 CPQQ9Y646 472 aa11.32□□□□□ -0.6
USP6NL-201ENST00000277575 CNOT3O75175 753 aaKnown RBP11.31□□□□□ -0.6
USP6NL-201ENST00000277575 ZMPSTE24O75844 475 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 STBD1O95210 358 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 DRD4P21917 467 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 HNRNPDQ14103 355 aaKnown RBP11.31□□□□□ -0.6
USP6NL-201ENST00000277575 GRM3Q14832 879 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 ATAT1Q5SQI0 421 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 RNF43Q68DV7 783 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 SCAMP5Q8TAC9 235 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 TBATAQ96M53 351 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 SEZ6LQ9BYH1 1024 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 GBA3Q9H227 469 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 RHBGQ9H310 441 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 RERGLQ9H628 205 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 HMGXB4Q9UGU5 601 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 SNX10Q9Y5X0 201 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 RPP40O75818 363 aaKnown RBP11.31□□□□□ -0.6
USP6NL-201ENST00000277575 PBX3P40426 434 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 NEK2P51955 445 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 ATXN1P54253 815 aaKnown RBP11.31□□□□□ -0.6
USP6NL-201ENST00000277575 PRKAG1P54619 331 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 RPL38P63173 70 aaKnown RBP11.31□□□□□ -0.6
USP6NL-201ENST00000277575 TRIP4Q15650 581 aaPredicted RBP11.31□□□□□ -0.6
USP6NL-201ENST00000277575 XKR6Q5GH73 641 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 OLFML2BQ68BL8 750 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 ANKS1BQ7Z6G8 1248 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 GDPD5Q8WTR4 605 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 TIFAQ96CG3 184 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 MCRS1Q96EZ8 462 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 TRMOQ9BU70 441 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 IL1RAPL1Q9NZN1 696 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 AP3M1Q9Y2T2 418 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 PCDHGC4Q9Y5F7 938 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 RGSL1A5PLK6 1076 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 MATN3O15232 486 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 EDF1O60869 148 aaKnown RBP11.31□□□□□ -0.6
USP6NL-201ENST00000277575 CDK14O94921 469 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 SNUPNO95149 360 aaKnown RBP11.31□□□□□ -0.6
USP6NL-201ENST00000277575 ATG7O95352 703 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 BPGMP07738 259 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 GUCA1AP43080 201 aaPredicted RBP11.31□□□□□ -0.6
USP6NL-201ENST00000277575 FASTKD3Q14CZ7 662 aaKnown RBP11.31□□□□□ -0.6
USP6NL-201ENST00000277575 ANKRD22Q5VYY1 191 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 PLEKHM3Q6ZWE6 761 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 FUKQ8N0W3 1084 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 RTL3Q8N8U3 475 aaKnown RBP11.31□□□□□ -0.6
USP6NL-201ENST00000277575 CLEC4CQ8WTT0 213 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 COL26A1Q96A83 441 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 LPIN3Q9BQK8 851 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 RAD21L1Q9H4I0 556 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 CACNG4Q9UBN1 327 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 FBXW11Q9UKB1 542 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 Q9Y3F1 56 aa11.31□□□□□ -0.6
USP6NL-201ENST00000277575 ARIH1Q9Y4X5 557 aaPredicted RBP11.31□□□□□ -0.6
USP6NL-201ENST00000277575 ZW10O43264 779 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 LYPLA1O75608 230 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 SERPINI2O75830 405 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 RECQL5O94762 991 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 DNTTP04053 509 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 EIF2S1P05198 315 aaKnown RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 C8AP07357 584 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 CLTBP09497 229 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 CDH4P55283 916 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 USP4Q13107 963 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 SQLEQ14534 574 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 FGD3Q5JSP0 725 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 RNASEH2BQ5TBB1 312 aaKnown RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 ZDHHC13Q8IUH4 622 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 RABGEF1Q9UJ41 708 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 LEF1Q9UJU2 399 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 MAPRE3Q9UPY8 281 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 TBC1D3DA0A087WVF3 549 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 TBC1D3IA0A087WXS9 549 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 TBC1D3EA0A087X179 549 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 TBC1D3KA0A087X1G2 549 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 TBC1D3FA6NER0 549 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 CCDC85CA6NKD9 419 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 TBC1D3LB9A6J9 549 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 RGS5O15539 181 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 NDUFS2O75306 463 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 GCATO75600 419 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 KCNH1O95259 989 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 NFATC1O95644 943 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 MT-CYBP00156 380 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 TBC1D3HP0C7X1 549 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 COX4I1P13073 169 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 TBC1D3GQ6DHY5 549 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 TBC1D3CQ6IPX1 549 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 CRTC3Q6UUV7 619 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 GET4Q7L5D6 327 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 TBC1D3Q8IZP1 549 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 C12orf50Q8NA57 414 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 DNAJB14Q8TBM8 379 aa11.3□□□□□ -0.6
USP6NL-201ENST00000277575 PTCD2Q8WV60 388 aaKnown RBP11.3□□□□□ -0.6
USP6NL-201ENST00000277575 HIC2Q96JB3 615 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms