RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 ZNF45Q02386 682 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 RTL4Q6ZR62 310 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 SLC35C2Q9NQQ7 365 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 PHPT1Q9NRX4 125 aaPredicted RBP13.31□□□□□ -0.28
PRDM16-201ENST00000270722 CISHQ9NSE2 258 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 SERPINE1P05121 402 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 YES1P07947 543 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 SPARCP09486 303 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 SLC29A2Q14542 456 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 LRIF1Q5T3J3 769 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 BORAQ6PGQ7 559 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 KCNMB4Q86W47 210 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 TMCO6Q96DC7 493 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 FAM111AQ96PZ2 611 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 ABCB10Q9NRK6 738 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 CLN6Q9NWW5 311 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 TULP4Q9NRJ4 1543 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 DGKIO75912 1065 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 IGKV5-2P06315 115 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 NEK3P51956 506 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 LAMTOR4Q0VGL1 99 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 POPDC2Q9HBU9 364 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 INTS10Q9NVR2 710 aaKnown RBP13.31□□□□□ -0.28
PRDM16-201ENST00000270722 PCDHB11Q9Y5F2 797 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 ACTL7BQ9Y614 415 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 CCNHP51946 323 aaPredicted RBP13.31□□□□□ -0.28
PRDM16-201ENST00000270722 PKP1Q13835 747 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 SORCS3Q9UPU3 1222 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 ERVW-1Q9UQF0 538 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 UBXN7O94888 489 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 CYP2F1P24903 491 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 RASGEF1BQ0VAM2 473 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 MFSD10Q14728 455 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 DENND1AQ8TEH3 1009 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 XKRYO14609 159 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 SSX4O60224 188 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 KCNH1O95259 989 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 ITGA3P26006 1051 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 CCZ1BP86790 482 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 CCZ1P86791 482 aaPredicted RBP13.31□□□□□ -0.28
PRDM16-201ENST00000270722 ELP6Q0PNE2 266 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 AGKQ53H12 422 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 C11orf63Q6NUN7 778 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 ARMC8Q8IUR7 673 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 CENPSQ8N2Z9 138 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 GDPD5Q8WTR4 605 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 CDADC1Q9BWV3 514 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 ERGIC3Q9Y282 383 aa13.31□□□□□ -0.28
PRDM16-201ENST00000270722 TRDMT1O14717 391 aaKnown RBP13.3□□□□□ -0.28
PRDM16-201ENST00000270722 RGL2O15211 777 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 CYP17A1P05093 508 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 MYL9P24844 172 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 CAPGP40121 348 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 ANKRD23Q86SG2 305 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 UNC93AQ86WB7 457 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 CEP97Q8IW35 865 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 GPC2Q8N158 579 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 MEIOBQ8N635 442 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 RHBDF1Q96CC6 855 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 PPP3R2Q96LZ3 170 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 NPHP3-ACAD11A0A0J9YXS1 232 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 ATP5F1P24539 256 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-201ENST00000270722 PSMB9P28065 219 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 HERVK_113P62684 666 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 CSHL1Q14406 222 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 RAET1GQ6H3X3 334 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 ZNF621Q6ZSS3 439 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 CHSY3Q70JA7 882 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 HELQQ8TDG4 1101 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 ASB15Q8WXK1 588 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 MYDGFQ969H8 173 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 CDC42BPBQ9Y5S2 1711 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 CLCA1A8K7I4 914 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 FKTNO75072 461 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 NADKO95544 446 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-201ENST00000270722 PLET1Q6UQ28 207 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 REPS2Q8NFH8 660 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 OR8K3Q8NH51 312 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 IGFLR1Q9H665 355 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 FARSAQ9Y285 508 aaKnown RBP13.3□□□□□ -0.28
PRDM16-201ENST00000270722 PREX2Q70Z35 1606 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 FAM86C2PA6NEL3 165 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 LRRC72A6NJI9 287 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 BTBD19C9JJ37 291 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 PGK1P00558 417 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 DPEP1P16444 411 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 ME2P23368 584 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 RFX4Q33E94 735 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 C4orf46Q504U0 113 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 ATAT1Q5SQI0 421 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 THAP5Q7Z6K1 395 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 PHC2Q8IXK0 858 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 FBXO22Q8NEZ5 403 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 INVSQ9Y283 1065 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 MAGEA12P43365 314 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 CLCN3P51790 818 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 TAS2R50P59544 299 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 PYDC2Q56P42 97 aa13.3□□□□□ -0.28
PRDM16-201ENST00000270722 SAMD14Q8IZD0 417 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-201ENST00000270722 SPATA6LQ8N4H0 392 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms