RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 ABHD15Q6UXT9 468 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 AKAP14Q86UN6 197 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 IFNLR1Q8IU57 520 aaPredicted RBP20.53■□□□□ 0.88
RARA-201ENST00000254066 SPPL2CQ8IUH8 684 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 FAM110BQ8TC76 370 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 CHAC2Q8WUX2 184 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 FUNDC2Q9BWH2 189 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 EML4Q9HC35 981 aaKnown RBP20.53■□□□□ 0.88
RARA-201ENST00000254066 RCOR3Q9P2K3 495 aaPredicted RBP20.53■□□□□ 0.88
RARA-201ENST00000254066 SLC39A10Q9ULF5 831 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 ILVBLA1L0T0 632 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 CCND2P30279 289 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 PTPN9P43378 593 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 YAP1P46937 504 aaKnown RBP20.53■□□□□ 0.88
RARA-201ENST00000254066 RAP1GAPP47736 663 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 SERPINB10P48595 397 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 ILF2Q12905 390 aaKnown RBP20.53■□□□□ 0.88
RARA-201ENST00000254066 STRIP1Q5VSL9 837 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 ARHGEF16Q5VV41 709 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 SLC16A12Q6ZSM3 486 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 VASH1Q7L8A9 365 aaPredicted RBP20.53■□□□□ 0.88
RARA-201ENST00000254066 CHST15Q7LFX5 561 aaPredicted RBP20.53■□□□□ 0.88
RARA-201ENST00000254066 KCNMB4Q86W47 210 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 ARMC8Q8IUR7 673 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 MFSD4AQ8N468 514 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 HDAC2Q92769 488 aaKnown RBP20.53■□□□□ 0.88
RARA-201ENST00000254066 ZNF486Q96H40 463 aaPredicted RBP20.53■□□□□ 0.88
RARA-201ENST00000254066 MRPL4Q9BYD3 311 aaKnown RBP20.53■□□□□ 0.88
RARA-201ENST00000254066 RHOJQ9H4E5 214 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 HPS4Q9NQG7 708 aa20.53■□□□□ 0.88
RARA-201ENST00000254066 ZMAT5Q9UDW3 170 aaKnown RBP20.53■□□□□ 0.88
RARA-201ENST00000254066 NME4O00746 187 aa20.52■□□□□ 0.88
RARA-201ENST00000254066 CHEK2O96017 543 aa20.52■□□□□ 0.88
RARA-201ENST00000254066 PSMB4P28070 264 aa20.52■□□□□ 0.88
RARA-201ENST00000254066 AXLP30530 894 aa20.52■□□□□ 0.88
RARA-201ENST00000254066 KPNA2P52292 529 aaKnown RBP20.52■□□□□ 0.88
RARA-201ENST00000254066 EFNA5P52803 228 aa20.52■□□□□ 0.88
RARA-201ENST00000254066 FOXM1Q08050 763 aa20.52■□□□□ 0.88
RARA-201ENST00000254066 GALNT1Q10472 559 aaPredicted RBP20.52■□□□□ 0.88
RARA-201ENST00000254066 AQP6Q13520 282 aa20.52■□□□□ 0.88
RARA-201ENST00000254066 UGT3A1Q6NUS8 523 aa20.52■□□□□ 0.88
RARA-201ENST00000254066 LCLAT1Q6UWP7 414 aa20.52■□□□□ 0.88
RARA-201ENST00000254066 SPARTQ8N0X7 666 aa20.52■□□□□ 0.88
RARA-201ENST00000254066 ZCCHC7Q8N3Z6 543 aaKnown RBP20.52■□□□□ 0.88
RARA-201ENST00000254066 MAGEE2Q8TD90 523 aaPredicted RBP20.52■□□□□ 0.88
RARA-201ENST00000254066 MFSD3Q96ES6 412 aa20.52■□□□□ 0.88
RARA-201ENST00000254066 PIH1D1Q9NWS0 290 aaKnown RBP20.52■□□□□ 0.88
RARA-201ENST00000254066 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.52■□□□□ 0.883e-7■■■■□ 24.8
RARA-201ENST00000254066 CRHBPP24387 322 aa20.52■□□□□ 0.87
RARA-201ENST00000254066 TUBA1BP68363 451 aa20.52■□□□□ 0.87
RARA-201ENST00000254066 IFRD2Q12894 506 aaPredicted RBP20.52■□□□□ 0.87
RARA-201ENST00000254066 GRM3Q14832 879 aa20.52■□□□□ 0.87
RARA-201ENST00000254066 TTC23LQ6PF05 361 aa20.52■□□□□ 0.87
RARA-201ENST00000254066 TUBA1AQ71U36 451 aa20.52■□□□□ 0.87
RARA-201ENST00000254066 SLC26A9Q7LBE3 791 aa20.52■□□□□ 0.87
RARA-201ENST00000254066 VSIG10LQ86VR7 867 aa20.52■□□□□ 0.87
RARA-201ENST00000254066 CDAN1Q8IWY9 1227 aa20.52■□□□□ 0.87
RARA-201ENST00000254066 CCNYL1Q8N7R7 359 aa20.52■□□□□ 0.87
RARA-201ENST00000254066 OSCP1Q8WVF1 389 aa20.52■□□□□ 0.87
RARA-201ENST00000254066 MUL1Q969V5 352 aa20.52■□□□□ 0.87
RARA-201ENST00000254066 TWNKQ96RR1 684 aa20.52■□□□□ 0.87
RARA-201ENST00000254066 RPAP3Q9H6T3 665 aaPredicted RBP20.52■□□□□ 0.87
RARA-201ENST00000254066 JPH1Q9HDC5 661 aaPredicted RBP20.52■□□□□ 0.87
RARA-201ENST00000254066 VANGL2Q9ULK5 521 aa20.52■□□□□ 0.87
RARA-201ENST00000254066 ACOT9Q9Y305 439 aa20.52■□□□□ 0.87
RARA-201ENST00000254066 TMEM233B4DJY2 109 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 SNAP29O95721 258 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 SLC35E2BP0CK96 405 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 CDH8P55286 799 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 GJA9P57773 515 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 PLCL1Q15111 1095 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 PGS1Q32NB8 556 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 LDLRAP1Q5SW96 308 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 ATAD3BQ5T9A4 648 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 ELMOD1Q8N336 334 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 CCDC126Q96EE4 140 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 P2RY11Q96G91 374 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 GTSE1Q9NYZ3 720 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 XPR1Q9UBH6 696 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 LDLRP01130 860 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 CCDC159P0C7I6 412 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 HDCP19113 662 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 ENPP1P22413 925 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 STX1BP61266 288 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 SLC6A3Q01959 620 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 USP10Q14694 798 aaKnown RBP20.51■□□□□ 0.87
RARA-201ENST00000254066 TAF2Q6P1X5 1199 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 LAYNQ6UX15 382 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 C14orf80Q86SX3 495 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 SLCO6A1Q86UG4 719 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 ZC3HC1Q86WB0 502 aaKnown RBP20.51■□□□□ 0.87
RARA-201ENST00000254066 DNAJC5GQ8N7S2 189 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 KCTD4Q8WVF5 259 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 HDAC11Q96DB2 347 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 PIWIL1Q96J94 861 aaKnown RBP20.51■□□□□ 0.87
RARA-201ENST00000254066 ING2Q9H160 280 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 CASS4Q9NQ75 786 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 ACSS2Q9NR19 701 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 AP4E1Q9UPM8 1137 aa20.51■□□□□ 0.87
RARA-201ENST00000254066 SSC5DA1L4H1 1573 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms