RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 CRTAC1Q9NQ79 661 aa9.46□□□□□ -0.89
HLA-DOA-201ENST00000229829 SLC2A6Q9UGQ3 507 aa9.46□□□□□ -0.89
HLA-DOA-201ENST00000229829 NOX1Q9Y5S8 564 aa9.46□□□□□ -0.89
HLA-DOA-201ENST00000229829 COPG1Q9Y678 874 aaKnown RBP9.46□□□□□ -0.89
HLA-DOA-201ENST00000229829 MYBPHLA2RUH7 354 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 TCAF2A6NFQ2 919 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 AURKAO14965 403 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 AKAP10O43572 662 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 LRIG2O94898 1065 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 VAPBO95292 243 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 CD4P01730 458 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 JAK1P23458 1154 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 GJA5P36382 358 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 BFSP2Q13515 415 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 ADGRE1Q14246 886 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 NANOGP8Q6NSW7 305 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 ESRP1Q6NXG1 681 aaKnown RBP9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 C16orf89Q6UX73 402 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 TMC5Q6UXY8 1006 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 GK5Q6ZS86 529 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 ZMIZ2Q8NF64 920 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 STYXQ8WUJ0 223 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 ISOC1Q96CN7 298 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 TEKT5Q96M29 485 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 NEURL2Q9BR09 285 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 PCDHAC1Q9H158 963 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 EPB41L1Q9H4G0 881 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 TNFRSF12AQ9NP84 129 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 C6orf203Q9P0P8 240 aaPredicted RBP9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 OR12D3Q9UGF7 316 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 FBXW11Q9UKB1 542 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 PRPF19Q9UMS4 504 aaKnown RBP9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 KCNH4Q9UQ05 1017 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 PCDHGA3Q9Y5H0 932 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 TLL2Q9Y6L7 1015 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 RALGAPA2Q2PPJ7 1873 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 C9IYK1 514 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 DENRO43583 198 aaKnown RBP9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 RNASEH2AO75792 299 aaKnown RBP9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 DARSP14868 501 aaKnown RBP9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 CD247P20963 164 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 GJA9P57773 515 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 DAOAP59103 153 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 UBXN11Q5T124 520 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 IL31Q6EBC2 164 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 LRRC8EQ6NSJ5 796 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 LIMS2Q7Z4I7 341 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 OFCC1Q8IZS5 231 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 KDM1BQ8NB78 822 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 STARD8Q92502 1023 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 ZNF560Q96MR9 790 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 GPR78Q96P69 363 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 SMOQ99835 787 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 COLEC11Q9BWP8 271 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 IL22Q9GZX6 179 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 TKTL2Q9H0I9 626 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 CXorf21Q9HAI6 301 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 ZFYVE28Q9HCC9 887 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 ZBTB26Q9HCK0 441 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 POLE4Q9NR33 117 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 GIN1Q9NXP7 522 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 KLHL42Q9P2K6 505 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 CDYLQ9Y232 598 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 ITM2BQ9Y287 266 aa9.46□□□□□ -0.9
HLA-DOA-201ENST00000229829 NRCAMQ92823 1304 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 NOTOA8MTQ0 251 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 KCNU1A8MYU2 1149 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 CABYRO75952 493 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 ATE1O95260 518 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 NPY2RP49146 381 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 PRKAA1Q13131 559 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 TICAM1Q8IUC6 712 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 CLIP4Q8N3C7 705 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 OR6J1Q8NGC5 347 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 CCDC138Q96M89 665 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 RHOJQ9H4E5 214 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 GIT1Q9Y2X7 761 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 AP1G1O43747 822 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 CYP2C9P11712 490 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 KCNA5P22460 613 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 ME2P23368 584 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 ARNTP27540 789 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 CCNA1P78396 465 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 GALNT2Q10471 571 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 CDH17Q12864 832 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 FOXD4Q12950 439 aaPredicted RBP9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 KCNJ8Q15842 424 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 SV2CQ496J9 727 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 AARS2Q5JTZ9 985 aaKnown RBP9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 PRAMEF19Q5SWL8 479 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 IL23RQ5VWK5 629 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 ELMSAN1Q6PJG2 1045 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 CNSTQ6PJW8 725 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 ZBTB49Q6ZSB9 765 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 PGAM4Q8N0Y7 254 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 CPSF7Q8N684 471 aaKnown RBP9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 TXNDC5Q8NBS9 432 aaKnown RBP9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 IPMKQ8NFU5 416 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 HMGCLL1Q8TB92 370 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 PDCD6IPQ8WUM4 868 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms