RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 ALG9Q9H6U8 611 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 CHMP1AQ9HD42 196 aaPredicted RBP10.49□□□□□ -0.73
VCL-201ENST00000211998 TBC1D14Q9P2M4 693 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 TRPC4Q9UBN4 977 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 SLC7A8Q9UHI5 535 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 TBC1D30Q9Y2I9 924 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 CYP1A1P04798 512 aaPredicted RBP10.49□□□□□ -0.73
VCL-201ENST00000211998 RHOCP08134 193 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 HGFP14210 728 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 NOS3P29474 1203 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 CDH15P55291 814 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 PTPN11Q06124 597 aaPredicted RBP10.49□□□□□ -0.73
VCL-201ENST00000211998 NFIAQ12857 509 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 PLD1Q13393 1074 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 AMHR2Q16671 573 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 ATP13A5Q4VNC0 1218 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 RNASE12Q5GAN4 147 aaKnown RBP10.49□□□□□ -0.73
VCL-201ENST00000211998 VWA5B1Q5TIE3 1220 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 NPNTQ6UXI9 565 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 GET4Q7L5D6 327 aaPredicted RBP10.49□□□□□ -0.73
VCL-201ENST00000211998 SLC4A11Q8NBS3 891 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 ADGRE3Q9BY15 652 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 ZNF717Q9BY31 904 aaPredicted RBP10.49□□□□□ -0.73
VCL-201ENST00000211998 CLPBQ9H078 707 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 MAP10Q9P2G4 905 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 ARHGAP28Q9P2N2 729 aa10.49□□□□□ -0.73
VCL-201ENST00000211998 ZW10O43264 779 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 ORC5O43913 435 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 LRIG2O94898 1065 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 HNRNPLP14866 589 aaKnown RBP eCLIP10.48□□□□□ -0.73
VCL-201ENST00000211998 PORP16435 677 aaPredicted RBP10.48□□□□□ -0.73
VCL-201ENST00000211998 EIF4BP23588 611 aaKnown RBP10.48□□□□□ -0.73
VCL-201ENST00000211998 FOXN2P32314 431 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 SDC2P34741 201 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 NR2C2P49116 596 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 CD83Q01151 205 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 KCNA10Q16322 511 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 ATP13A4Q4VNC1 1196 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 CCSAPQ6IQ19 270 aaPredicted RBP10.48□□□□□ -0.73
VCL-201ENST00000211998 ZNF549Q6P9A3 640 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 CENPNQ96H22 339 aaPredicted RBP10.48□□□□□ -0.73
VCL-201ENST00000211998 TRNT1Q96Q11 434 aaKnown RBP10.48□□□□□ -0.73
VCL-201ENST00000211998 MTFR1LQ9H019 292 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 LGALS13Q9UHV8 139 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 KIAA1210Q9ULL0 1709 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 CKMP06732 381 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 TSPAN8P19075 237 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 MIPP30301 263 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 RENBPP51606 427 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 ZCCHC8Q6NZY4 707 aaKnown RBP10.48□□□□□ -0.73
VCL-201ENST00000211998 MIB1Q86YT6 1006 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 EPS8L1Q8TE68 723 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 ZNF285Q96NJ3 590 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 ZSCAN5AQ9BUG6 496 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 EIF3KQ9UBQ5 218 aaKnown RBP10.48□□□□□ -0.73
VCL-201ENST00000211998 EFR3BQ9Y2G0 817 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 ZNF879B4DU55 563 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 PLK4O00444 970 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 CXCL11O14625 94 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 APOL3O95236 402 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 ITGA3P26006 1051 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 AXLP30530 894 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 PTPN5P54829 565 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 CAMK2GQ13555 558 aaPredicted RBP10.48□□□□□ -0.73
VCL-201ENST00000211998 ZNF267Q14586 743 aaPredicted RBP10.48□□□□□ -0.73
VCL-201ENST00000211998 USF2Q15853 346 aaPredicted RBP10.48□□□□□ -0.73
VCL-201ENST00000211998 PFKFB4Q16877 469 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 FBXO47Q5MNV8 452 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 CERS2Q96G23 380 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 LENG8Q96PV6 779 aaPredicted RBP10.48□□□□□ -0.73
VCL-201ENST00000211998 TBCBQ99426 244 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 KAT8Q9H7Z6 458 aaKnown RBP10.48□□□□□ -0.73
VCL-201ENST00000211998 TMEM216Q9P0N5 145 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 MAGEL2Q9UJ55 1249 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 FRMPD4Q14CM0 1322 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 ZNF99A8MXY4 864 aaPredicted RBP10.48□□□□□ -0.73
VCL-201ENST00000211998 RBAK-RBAKDNI3L0D1 243 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 PGLSO95336 258 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 VTNP04004 478 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 MPSTP25325 297 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 TIE1P35590 1138 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 RHOAP61586 193 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 LAMTOR4Q0VGL1 99 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 MAPKAPK3Q16644 382 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 PIWIL4Q7Z3Z4 852 aaKnown RBP10.48□□□□□ -0.73
VCL-201ENST00000211998 NT5DC4Q86YG4 428 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 SLC34A3Q8N130 599 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 CARNMT1Q8N4J0 409 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 FNDC8Q8TC99 324 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 PURBQ96QR8 312 aaKnown RBP10.48□□□□□ -0.73
VCL-201ENST00000211998 DHX33Q9H6R0 707 aaKnown RBP10.48□□□□□ -0.73
VCL-201ENST00000211998 BTRCQ9Y297 605 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 PRKAB1Q9Y478 270 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 NWD1Q149M9 1564 aa10.48□□□□□ -0.73
VCL-201ENST00000211998 KCNU1A8MYU2 1149 aa10.47□□□□□ -0.73
VCL-201ENST00000211998 FAM25EA8MYX2 175 aa10.47□□□□□ -0.73
VCL-201ENST00000211998 KLRC4O43908 158 aa10.47□□□□□ -0.73
VCL-201ENST00000211998 METTL18O95568 372 aa10.47□□□□□ -0.73
VCL-201ENST00000211998 IFNA7P01567 189 aa10.47□□□□□ -0.73
VCL-201ENST00000211998 LTA4HP09960 611 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms