RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Klhl5Q6PFE1 708 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Lin52Q8CD94 116 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Vmn1r79Q8R285 306 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Smg8Q8VE18 991 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Cyp4f3Q99N16 524 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Mrpl45Q9D0Q7 306 aaKnown RBP9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Bcl2l12Q9D3J3 255 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Ssr3Q9DCF9 185 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Gm5485A0A1D5RM98 91 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Akirin2B1AXD8 201 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Tcp10cE9Q046 482 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 ChgbP16014 677 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Shmt1P50431 478 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Scarf1Q5ND28 820 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 CltbQ6IRU5 229 aaKnown RBP9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 GnasQ6R0H7 1133 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Fnip2Q80TD3 1108 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Wasf2Q8BH43 497 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Slc9a9Q8BZ00 644 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Fbxo21Q8VDH1 627 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Socs4Q91ZA6 436 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Chid1Q922Q9 393 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 BollQ924M5 281 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Mrpl28Q9D1B9 257 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Rsph9Q9D9V4 276 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Armc8Q9DBR3 673 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Paqr5Q9DCU0 330 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Fam155bA2BDP1 471 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Itih4A6X935 942 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Gm5799E9Q2M1 201 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Dusp8O09112 663 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 PurbO35295 324 aaKnown RBP9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Cops5O35864 334 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Tpst2O88856 376 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 CkmP07310 381 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Clec2lP0C7M9 211 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 JundP15066 341 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 MylpfP97457 169 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Ccdc61Q3UJV1 511 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Dennd5aQ6PAL8 1287 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Ankrd52Q8BTI7 1076 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Dennd1cQ8CFK6 786 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Spag16Q8K450 639 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Pcdhb13Q91Y06 796 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Slc24a3Q99PD7 645 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 ChmlQ9QZD5 621 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Slc26a3Q9WVC8 757 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Gm7145A0A087WS64 360 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Itga8A2ARA8 1062 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Zscan5bB2RTN3 468 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 JhyE9Q793 770 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Anxa6P14824 673 aaKnown RBP9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Creb1Q01147 341 aaKnown RBP9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Col28a1Q2UY11 1141 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Itga2Q62469 1178 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Ggnbp1Q6K1E7 370 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Arhgef33Q8BW86 850 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Chil4Q91Z98 402 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Cmc1Q9CPZ8 106 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Aldh9a1Q9JLJ2 494 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Fkbp9Q9Z247 570 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Gm7275E9Q1B3 247 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Cdkl4Q3TZA2 342 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Mpzl3Q3V3F6 237 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Bend6Q6PFX2 281 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Tmco1Q921L3 188 aaKnown RBP9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Trappc5Q9CQA1 188 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 IgtpQ9DCE9 423 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Il22bQ9JJY8 179 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Disp2Q8CIP5 1345 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 A930018M24RikB7ZMY3 218 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 H2-EaP01904 255 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 P04224 255 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Cyp2c54Q6XVG2 490 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Arhgef38Q80VK6 770 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Tspan9Q8BJU2 239 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Elmo1Q8BPU7 727 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ctxn3Q8BXZ0 80 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Mta1Q8K4B0 715 aaKnown RBP9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Mark1Q8VHJ5 795 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Olfr703Q9EPF5 319 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Cables1Q9ESJ1 568 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Gria3Q9Z2W9 888 aa9.4□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 DnmbpQ6TXD4 1580 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Chil5A0A0G2JDS2 431 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Gm5407E9Q7Q1 248 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Vmn2r70K7N702 854 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Mup13L7N222 235 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Mybpc3O70468 1270 aaKnown RBP9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Kcnj2P35561 428 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Eif2b4Q61749 524 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Cpsf6Q6NVF9 551 aaKnown RBP9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Naaladl1Q7M758 745 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Mtmr12Q80TA6 747 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ugt2a1Q80X89 528 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 SvopQ8BFT9 548 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Clptm1lQ8BXA5 539 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Wdr55Q9CX97 388 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ribc2Q9D4Q1 309 aa9.39□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 PfkpQ9WUA3 784 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms