RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Uckl1Q91YL3 548 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Camk2gQ923T9 529 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Adad2Q9D5P4 478 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 SgshQ9EQ08 502 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Capn7Q9R1S8 813 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Msl3Q9WVG9 525 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Atp6v1c1Q9Z1G3 382 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Baz2bA2AUY4 2123 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Vmn2r27D3YUK6 857 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Pate1E9Q658 125 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 E030030I06RikJ3QML9 246 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 C1qbpO35658 278 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 CblP22682 913 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Pla2g4dQ50L43 825 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Grm6Q5NCH9 871 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Runx1t1Q61909 577 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Pggt1bQ8BUY9 377 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Slco2b1Q8BXB6 683 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Fam126bQ8C729 530 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 LipmQ8K2A6 422 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Defb19Q8K3I8 83 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Slc8a2Q8K596 921 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Mgat5Q8R4G6 740 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Pcdhb13Q91Y06 796 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Cdk9Q99J95 372 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Gemin2Q9CQQ4 269 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Creb3l4Q9D2A5 370 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Slc13a1Q9JHI4 594 aa11.43□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Numa1E9Q7G0 2094 aaKnown RBP11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Gm43951A0A0N4SUT6 962 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Arhgef26D3YYY8 869 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Mapk12O08911 367 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Hes2O54792 157 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 P01641 117 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 KitP05532 979 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Rpl10aP53026 217 aaKnown RBP11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 SobpQ0P5V2 864 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Cpne7Q0VE82 557 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Itih2Q61703 946 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Nomo1Q6GQT9 1214 aaKnown RBP11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 SepsecsQ6P6M7 504 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Chsy1Q6ZQ11 800 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Cstf2Q8BIQ5 580 aaKnown RBP11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Smarcal1Q8BJL0 910 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Ano4Q8C5H1 955 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Hmgcll1Q8JZS7 343 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Cuedc1Q8R3V6 388 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Atad1Q9D5T0 361 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Ralgps2Q9ERD6 590 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Tmem115Q9WUH1 350 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Calhm3J3QMI4 347 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Gabpb1Q00420 383 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 DselQ0VBN2 1207 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Arhgap45Q3TBD2 1116 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Six4Q61321 775 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Wee2Q66JT0 555 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Inppl1Q6P549 1257 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Tas2r109Q7M707 316 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Tfap2dQ91ZK0 452 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Ddx28Q9CWT6 540 aaKnown RBP11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Q9D979 236 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Cab39lQ9DB16 337 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 TfebQ9R210 475 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 FarsbQ9WUA2 589 aaKnown RBP11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 ApipQ9WVQ5 241 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Smarcb1Q9Z0H3 385 aa11.42□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Gm45861A0A1B0GRY3 1923 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Znf106O88466 1888 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Dhx35A2ACQ1 703 aaKnown RBP11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Kpna7C0LLJ0 499 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Raph1F2Z3U3 1266 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Vmn2r88L7N1W8 857 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 DldO08749 509 aaKnown RBP11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Eno2P17183 434 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Klf1P46099 358 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Timm13P62075 95 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Prmt9Q3U3W5 846 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 OtulinQ3UCV8 352 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 GcdhQ60759 438 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Rtl3Q6P1Y1 553 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Tas2r129Q7M709 320 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Olfr299Q7TS05 330 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Zbtb41Q811F1 908 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Q8BGA7 448 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Sephs1Q8BH69 392 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 CherpQ8CGZ0 936 aaKnown RBP11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Tada2aQ8CHV6 443 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Asb2Q8K0L0 634 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Rps6kl1Q8R2S1 544 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 ClmpQ8R373 373 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 TgdsQ8VDR7 355 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Pofut2Q8VHI3 429 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Pcdha6Q91Y14 946 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Acot13Q9CQR4 140 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Dtwd1Q9D8U7 304 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Tor1aQ9ER39 333 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Slfn2Q9Z0I6 378 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 GghQ9Z0L8 317 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Igkv5-45A0A0B4J1J1 115 aa11.41□□□□□ -0.58
Ddx55-201ENSMUST00000071057 Supt3B0QZW4 406 aa11.41□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 61.6 ms