RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Syvn1Q9DBY1 612 aa18.48■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Trhr2Q9ERT2 382 aa18.48■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Gm5160F8VPN3 147 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Gm20828J3KMI7 228 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Ptpn20O55082 426 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Cdh9P70407 786 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Cd300lgQ1ERP8 331 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 HltfQ6PCN7 1003 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Lrfn2Q80TG9 788 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Abraxas1Q8BPZ8 407 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Rmdn2Q8BSE0 410 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 TiparpQ8C1B2 657 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Parp9Q8CAS9 866 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Wnt9aQ8R5M2 365 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Smim11aQ99J19 55 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Lrrc4Q99PH1 652 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Rpl34Q9D1R9 117 aaKnown RBP18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Hormad1Q9D5T7 392 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Dnmt3aO88508 908 aaKnown RBP18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Camk4P08414 469 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Hoxc8P09025 242 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Csf3rP40223 837 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 GemP55041 295 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 AcadsQ07417 412 aaKnown RBP18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Dnajb14Q149L6 379 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Six3Q62233 333 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Tnfsf13Q9D777 241 aa18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Bag6Q9Z1R2 1154 aaKnown RBP18.47■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 NfkbieO54910 364 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 ArsaP50428 506 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 ItkQ03526 625 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Cntnap5bQ0V8T8 1292 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 KrtdapQ3V2T4 102 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Fam160a1Q505K2 1081 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Rabl6Q5U3K5 725 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Otud6aQ6IE21 290 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 TpbglQ8C013 384 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Iqsec1Q8R0S2 961 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Wdr89Q9D0R9 386 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 VarsQ9Z1Q9 1263 aaKnown RBP18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Prr14lE9Q7C4 1971 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Vmn1r3A2AMT7 306 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Svs4P18419 113 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 OxtrP97926 388 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Ubxn2bQ0KL01 331 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Fscn1Q61553 493 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Olfr1128Q7TR47 311 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 RubcnQ80U62 956 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Nkiras1Q8CEC5 192 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Vmn1r79Q8R285 306 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Exd2Q8VEG4 650 aaKnown RBP18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Pcdh18Q8VHR0 1134 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Nmd3Q99L48 503 aaKnown RBP18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 CinpQ9D0V8 212 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Fam162aQ9D6U8 155 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Oser1Q9D722 291 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Ptk2bQ9QVP9 1009 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Cib1Q9Z0F4 191 aa18.46■□□□□ 0.55
Ccdc3-201ENSMUST00000027988 Gm8369E9PZI3 166 aa18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Gm43302L7N1X8 611 aa18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Vmn2r61L7N2B8 865 aa18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Cd86P42082 309 aa18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Polr3bP59470 1133 aa18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 StacP97306 403 aa18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Gbp10Q000W5 611 aa18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Tmem102Q3UPR7 509 aa18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Krt32Q62168 407 aa18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Olfr1198Q7TR12 308 aa18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Olfr698Q7TRN4 311 aa18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Gpr21Q8BX79 349 aa18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Fmo9Q8C116 539 aa18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Mrps2Q924T2 291 aaKnown RBP18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 GatbQ99JT1 557 aa18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Ddx50Q99MJ9 734 aaKnown RBP18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Kat2bQ9JHD1 813 aa18.46■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Igkv5-45A0A0B4J1J1 115 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Rpl36P47964 105 aaKnown RBP18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 AdslP54822 484 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Serpina5P70458 405 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 SPINDOCQ05AH6 381 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Uimc1Q5U5Q9 727 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Rfx4Q7TNK1 735 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Olfr295Q7TS08 309 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Metap1Q8BP48 386 aaKnown RBP18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 DeraQ91YP3 318 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Rnf31Q924T7 1066 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Mpp6Q9JLB0 553 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Fbxo17Q9QZM8 286 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Igkv10-96A0A140T8M1 115 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Gm20503G3UZK1 150 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Hs3st1O35310 311 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Cyp2a12P56593 492 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Timm13P62075 95 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Sap25Q1EHW4 186 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Tatdn1Q6P8M1 295 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Frs2Q8C180 508 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Fam78aQ8C552 283 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 4933409G03RikQ8C5U0 320 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Zswim3Q8CFL8 695 aa18.45■□□□□ 0.54
Ccdc3-201ENSMUST00000027988 Tbc1d22aQ8R5A6 516 aa18.45■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 22 ms