RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Creld1Q91XD7 420 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 PirQ9D711 290 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Slc23a4A0A0J9YUX7 615 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Gm379J3QQ19 296 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 NcstnP57716 708 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Satb1Q60611 764 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Ckap2lQ7TS74 745 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Tspan18Q80WR1 248 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 GnsQ8BFR4 544 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Stx5Q8K1E0 355 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 DgkgQ91WG7 788 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Necab2Q91ZP9 389 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Cmc1Q9CPZ8 106 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Lrrc40Q9CRC8 602 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Ccr10Q9JL21 362 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Cpxm1Q9Z100 722 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Arih2Q9Z1K6 492 aa12.1□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Ccdc120A2AEV7 629 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Acp4D3YTS9 425 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Abcd2Q61285 741 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Fstl1Q62356 306 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Cgrrf1Q8BMJ7 332 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Pcdhga6Q91XY2 932 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Oas1cQ924S2 362 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 GatbQ99JT1 557 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Fip1l1Q9D824 581 aaKnown RBP12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Rhobtb1Q9DAK3 695 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Nhsl1Q8CAF4 1587 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Myh8P13542 1937 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Rhbdl2A2AGA4 302 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Glyatl3E9Q5L8 290 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Pde9aO70628 534 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 InvsO89019 1062 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Mcpt4P21812 246 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Cd247P24161 164 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Prickle1Q3U5C7 832 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Ppm1hQ3UYC0 513 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 CcncQ62447 283 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Gid8Q9D7M1 228 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Leng1Q9DB98 261 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Atp6ap1Q9R1Q9 463 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Mbtps1Q9WTZ2 1052 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Smchd1Q6P5D8 2007 aaKnown RBP12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Klhl3E0CZ16 587 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Ccdc62E9PVD1 701 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Map3k7clP58500 142 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 HadhQ61425 314 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 VwdeQ6DFV8 926 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Enpp3Q6DYE8 874 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Tmc7Q8C428 726 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Hmgcll1Q8JZS7 343 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Olfr1302Q8VGE9 315 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Ccdc97Q9DBT3 340 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Rfx5Q9JL61 658 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Gria4Q9Z2W8 902 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Zfp831A2ADM8 1628 aa12.09□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Ptar1E9QAB6 424 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Gm20503G3UZK1 150 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 NmbrO54799 390 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Ltb4rO88855 351 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Surf2P09926 257 aaKnown RBP12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 H2-Q7P14429 334 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 H2-Q9P14431 200 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Rab10P61027 200 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 EsrrgP62509 458 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Ap2m1P84091 435 aaKnown RBP12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Mc1rQ01727 315 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Dmc1Q61880 340 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Magee1Q6PCZ4 918 aaKnown RBP12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Olfr1080Q7TR67 313 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Psapl1Q8C1C1 522 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Mapk8Q91Y86 384 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Mrfap1Q9CQL7 125 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Sh2d4aQ9D7V1 421 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 QkiQ9QYS9 341 aaKnown RBP12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Scnn1gQ9WU39 655 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Entpd5Q9WUZ9 427 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Gm6811E9Q3Y8 510 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Cyp27b1O35084 507 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 PigrO70570 771 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Vps45P97390 570 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 HnrnpdQ60668 355 aaKnown RBP12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Xlr3cQ61806 226 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Egfl8Q6GUQ1 293 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Wasf2Q8BH43 497 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 TdrpQ8C5P7 182 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Tdrd7Q8K1H1 1086 aaKnown RBP12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Ddx52Q8K301 598 aaKnown RBP12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Dnajc18Q9CZJ9 357 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Efcab9Q9DAM2 216 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Mpp5Q9JLB2 675 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Numa1E9Q7G0 2094 aaKnown RBP12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Usp51B1AY15 661 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Gm10719E9Q7T3 227 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Ap2a1P17426 977 aaKnown RBP12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Klrb1aP27811 227 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 EdnrbP48302 442 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 CenpcP49452 906 aaKnown RBP12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Galnt3P70419 633 aa12.08□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Pecam1Q08481 727 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms