RNA–Protein interactions for RNA: ENST00000622647.3

ZNF48-206, Transcript of zinc finger protein 48, humanhuman

TSL 4 BASIC

Gene ZNF48, Length 2,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-206ENST00000622647 DEFB107AQ8IZN7 70 aa17.81■□□□□ 0.44
ZNF48-206ENST00000622647 ARHGAP24Q8N264 748 aa17.81■□□□□ 0.44
ZNF48-206ENST00000622647 RSRC1Q96IZ7 334 aaKnown RBP17.81■□□□□ 0.44
ZNF48-206ENST00000622647 TTC1Q99614 292 aa17.81■□□□□ 0.44
ZNF48-206ENST00000622647 SIKE1Q9BRV8 207 aa17.81■□□□□ 0.44
ZNF48-206ENST00000622647 ELAC1Q9H777 363 aaKnown RBP17.81■□□□□ 0.44
ZNF48-206ENST00000622647 ARNT2Q9HBZ2 717 aa17.81■□□□□ 0.44
ZNF48-206ENST00000622647 PLXNA3P51805 1871 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 MATN2O00339 956 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 AIM2O14862 343 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 COCHO43405 550 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 CIB2O75838 187 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 CRABP2P29373 138 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 KCNC1P48547 511 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 PSEN1P49768 467 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 CLNS1AP54105 237 aaKnown RBP17.8■□□□□ 0.44
ZNF48-206ENST00000622647 KLF10Q13118 480 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 SEMA3AQ14563 771 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 TCHHL1Q5QJ38 904 aaPredicted RBP17.8■□□□□ 0.44
ZNF48-206ENST00000622647 SH2D4BQ5SQS7 431 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 LINGO4Q6UY18 593 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 CILP2Q8IUL8 1156 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 TEX26Q8N6G2 289 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 SNX31Q8N9S9 440 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 PTCD2Q8WV60 388 aaKnown RBP17.8■□□□□ 0.44
ZNF48-206ENST00000622647 POLR1EQ9GZS1 481 aaKnown RBP17.8■□□□□ 0.44
ZNF48-206ENST00000622647 RNF38Q9H0F5 515 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 MRPL46Q9H2W6 279 aaKnown RBP17.8■□□□□ 0.44
ZNF48-206ENST00000622647 MRM3Q9HC36 420 aaKnown RBP17.8■□□□□ 0.44
ZNF48-206ENST00000622647 TNFRSF12AQ9NP84 129 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.8■□□□□ 0.44
ZNF48-206ENST00000622647 DNMT3LQ9UJW3 386 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 C2orf78A6NCI8 922 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 CBX4O00257 560 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 ACSL4O60488 711 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 PRAMEF11O60813 436 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 GOT2P00505 430 aaKnown RBP17.8■□□□□ 0.44
ZNF48-206ENST00000622647 APOA4P06727 396 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 COX4I1P13073 169 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 PLD1Q13393 1074 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 NAA25Q14CX7 972 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 TRIM67Q6ZTA4 783 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 PDCD6IPQ8WUM4 868 aaKnown RBP17.8■□□□□ 0.44
ZNF48-206ENST00000622647 SPATA17Q96L03 361 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 ALG9Q9H6U8 611 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 VPS45Q9NRW7 570 aa17.8■□□□□ 0.44
ZNF48-206ENST00000622647 H7C4K7 107 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 SPATA31D3P0C874 917 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 MSX2P35548 267 aaPredicted RBP17.79■□□□□ 0.44
ZNF48-206ENST00000622647 POU4F1Q01851 419 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 GNA12Q03113 381 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 PARP15Q460N3 678 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 FBXO48Q5FWF7 155 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 SPATA31D4Q6ZUB0 917 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 SSX2IPQ9Y2D8 614 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 VWA7Q9Y334 891 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 CCDC162PA2VCL2 907 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 HDAC3O15379 428 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 MAGEC1O60732 1142 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 S1PR4O95977 384 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 RAP1GDS1P52306 607 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 TAF12Q16514 161 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 DNAL1Q4LDG9 190 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 TMCO4Q5TGY1 634 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 RMDN1Q96DB5 314 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 PRICKLE1Q96MT3 831 aaPredicted RBP17.79■□□□□ 0.44
ZNF48-206ENST00000622647 HIPK3Q9H422 1215 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 MID2Q9UJV3 735 aa17.79■□□□□ 0.44
ZNF48-206ENST00000622647 LOC285095A0A1B0GVY8 99 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 ZDHHC11BP0C7U3 371 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 COL6A1P12109 1028 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 HOXD9P28356 352 aaPredicted RBP17.78■□□□□ 0.44
ZNF48-206ENST00000622647 CORO1AP31146 461 aaKnown RBP17.78■□□□□ 0.44
ZNF48-206ENST00000622647 ELF1P32519 619 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 LEPRP48357 1165 aaKnown RBP17.78■□□□□ 0.44
ZNF48-206ENST00000622647 TBCCQ15814 346 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 HPS6Q86YV9 775 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 PPP1R2P1Q96PQ5 205 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 STN1Q9H668 368 aaKnown RBP17.78■□□□□ 0.44
ZNF48-206ENST00000622647 PCDHGC4Q9Y5F7 938 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 SPO11Q9Y5K1 396 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 ZNF840PA6NDX5 716 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 MROH6A6NGR9 719 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 PDHA1P08559 390 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 ITGAXP20702 1163 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 MUM1Q2TAK8 710 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 SNX32Q86XE0 403 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 SLAIN1Q8ND83 568 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 NAT14Q8WUY8 206 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 PYDC1Q8WXC3 89 aa17.78■□□□□ 0.44
ZNF48-206ENST00000622647 MRPL57Q9BQC6 102 aaKnown RBP17.78■□□□□ 0.44
ZNF48-206ENST00000622647 MMADHCQ9H3L0 296 aaPredicted RBP17.78■□□□□ 0.44
ZNF48-206ENST00000622647 ATXN3P54252 364 aaPredicted RBP17.77■□□□□ 0.44
ZNF48-206ENST00000622647 PRKAA1Q13131 559 aa17.77■□□□□ 0.44
ZNF48-206ENST00000622647 FAM83EQ2M2I3 478 aa17.77■□□□□ 0.44
ZNF48-206ENST00000622647 CCDC117Q8IWD4 279 aaPredicted RBP17.77■□□□□ 0.44
ZNF48-206ENST00000622647 RDH11Q8TC12 318 aa17.77■□□□□ 0.44
ZNF48-206ENST00000622647 NAF1Q96HR8 494 aaKnown RBP17.77■□□□□ 0.44
ZNF48-206ENST00000622647 CLSTN3Q9BQT9 956 aa17.77■□□□□ 0.44
ZNF48-206ENST00000622647 ZBED2Q9BTP6 218 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms