RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 OXCT1P55809 520 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 PDCLQ13371 301 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 TCEAL1Q15170 157 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 PRRT3Q5FWE3 981 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 CCDC181Q5TID7 509 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 SYPL2Q5VXT5 272 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 PAPD7Q5XG87 772 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 C1orf131Q8NDD1 294 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 TMIEQ8NEW7 156 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 BTN2A2Q8WVV5 523 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 ZNF653Q96CK0 615 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 GFM1Q96RP9 751 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 PRMT1Q99873 361 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 SELENOOQ9BVL4 669 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 APOBEC3BQ9UH17 382 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 RABGEF1Q9UJ41 708 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 OR51B4Q9Y5P0 310 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 MRFAP1Q9Y605 127 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 SCINQ9Y6U3 715 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 DUSP10Q9Y6W6 482 aa17.84■□□□□ 0.45
TRAPPC3-209ENST00000616395 UQCRHLA0A096LP55 91 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 PRAMEF33A0A0G2JMD5 474 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 A0A0U1RQJ8 604 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 D6RAR5 112 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 LMO7DNF2Z398 122 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 TMX2-CTNND1H3BSU7 103 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 AGRPO00253 132 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 PRAMEF10O60809 474 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 FBXO21O94952 628 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 MT-CO1P00395 513 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 UQCRHP07919 91 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 ANXA6P08133 673 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 SRCP12931 536 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 CHRNB2P17787 502 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 ITIH1P19827 911 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 PAFAH1B1P43034 410 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 RPS21P63220 83 aaKnown RBP17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 CENPCQ03188 943 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 CCDC70Q6NSX1 233 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 PEX26Q7Z412 305 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 DAAM2Q86T65 1068 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 WDTC1Q8N5D0 677 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 CHST14Q8NCH0 376 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 FAM149B1Q96BN6 582 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 HSFY1Q96LI6 401 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 PACSIN1Q9BY11 444 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 HDAC8Q9BY41 377 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 LRRC4CQ9HCJ2 640 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 VPS28Q9UK41 221 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 AMFRQ9UKV5 643 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 PCDHGC3Q9UN70 934 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 LOXL2Q9Y4K0 774 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 PCDHB11Q9Y5F2 797 aa17.83■□□□□ 0.44
TRAPPC3-209ENST00000616395 K7ERQ8 282 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 FPGTO14772 594 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 YY2O15391 372 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 PALMO75781 387 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 PRNPP04156 253 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 CCL7P80098 99 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 KCNAB2Q13303 367 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 RPS6KA1Q15418 735 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 ARSIQ5FYB1 569 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 RABGAP1LQ5R372 815 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 TTC39BQ5VTQ0 682 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 KIAA1161Q6NSJ0 714 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 ESRP1Q6NXG1 681 aaKnown RBP17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 DTX1Q86Y01 620 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 SDR16C5Q8N3Y7 309 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 SLC35G2Q8TBE7 412 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 GRIN3AQ8TCU5 1115 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 CCDC74AQ96AQ1 378 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 CCDC114Q96M63 670 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 CPXM1Q96SM3 734 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 KLF6Q99612 283 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 LRRC61Q9BV99 259 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 SLC4A5Q9BY07 1137 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 FOXJ2Q9P0K8 574 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 GULP1Q9UBP9 304 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 PNMA8BQ9ULN7 279 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 HS3ST2Q9Y278 367 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 CAPN6Q9Y6Q1 641 aa17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 TEP1Q99973 2627 aaKnown RBP17.82■□□□□ 0.44
TRAPPC3-209ENST00000616395 A0A1W2PQM1 296 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 ENO4A6NNW6 628 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 KCNU1A8MYU2 1149 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 CYP1A1P04798 512 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 RPLP0P05388 317 aaKnown RBP17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 CCKBRP32239 447 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 ETV5P41161 510 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 RPL34P49207 117 aaKnown RBP17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 IRAK1P51617 712 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 POLE2P56282 527 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 PFN3P60673 137 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 TAF5Q15542 800 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 FBXL22Q6P050 247 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 BORAQ6PGQ7 559 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 PHACTR4Q8IZ21 702 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 ATP6V0D2Q8N8Y2 350 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 ATP11CQ8NB49 1132 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 FEM1CQ96JP0 617 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms