RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 KCNH7Q9NS40 1196 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 CORO2BQ9UQ03 480 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 MAGED1Q9Y5V3 778 aaPredicted RBP12.7□□□□□ -0.38
TCF4-248ENST00000616053 ARPC2O15144 300 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 ACTL6BO94805 426 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 LINGO3P0C6S8 592 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 GABRR2P28476 465 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 ACLYP53396 1101 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 CDK10Q15131 360 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 SLAIN1Q8ND83 568 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 REEP2Q9BRK0 252 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 PNO1Q9NRX1 252 aaKnown RBP12.7□□□□□ -0.38
TCF4-248ENST00000616053 PARPBPQ9NWS1 579 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 FAM153AQ9UHL3 310 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 ZNF510Q9Y2H8 683 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 SLCO1B7G3V0H7 640 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 MT-ND5P03915 603 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 UBTFL6P0CB48 400 aaPredicted RBP12.7□□□□□ -0.38
TCF4-248ENST00000616053 KCNA10Q16322 511 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 TIMM50Q3ZCQ8 353 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 C3orf33Q6P1S2 294 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 GPALPP1Q8IXQ4 340 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 KLHL15Q96M94 604 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 ANKZF1Q9H8Y5 726 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 ST3GAL5Q9UNP4 418 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 JCADQ9P266 1359 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 FAM153BP0C7A2 387 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 CMPK1P30085 196 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 PROSER3Q2NL68 480 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 LYPLAL1Q5VWZ2 237 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 NEDD4P46934 1319 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 METP08581 1390 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 BTN3A3O00478 584 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 TULP3O75386 442 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 FASP25445 335 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 C1QBPQ07021 282 aaKnown RBP12.7□□□□□ -0.38
TCF4-248ENST00000616053 KLHL26Q53HC5 615 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 CCNYL2Q5T2Q4 361 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 QSOX2Q6ZRP7 698 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 C17orf64Q86WR6 236 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 OXR1Q8N573 874 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 LINC00301Q8NCQ3 95 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 DYTNA2CJ06 578 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 HJURPQ8NCD3 748 aaPredicted RBP12.7□□□□□ -0.38
TCF4-248ENST00000616053 ATP8B4Q8TF62 1192 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 FEM1CQ96JP0 617 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 COX4I2Q96KJ9 171 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 GPATCH2LQ9NWQ4 482 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 EHD3Q9NZN3 535 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 LAMC3Q9Y6N6 1575 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 HNF1BP35680 557 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 MLLT3P42568 568 aaPredicted RBP12.69□□□□□ -0.38
TCF4-248ENST00000616053 SNRPFP62306 86 aaKnown RBP12.69□□□□□ -0.38
TCF4-248ENST00000616053 ZNF844Q08AG5 666 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 TBX2Q13207 712 aaPredicted RBP12.69□□□□□ -0.38
TCF4-248ENST00000616053 FAM153CQ494X1 144 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 TMEM35AQ53FP2 167 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 STOX1Q6ZVD7 989 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 ZNF589Q86UQ0 364 aaPredicted RBP12.69□□□□□ -0.38
TCF4-248ENST00000616053 MEIOBQ8N635 442 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 BOLLQ8N9W6 283 aaKnown RBP12.69□□□□□ -0.38
TCF4-248ENST00000616053 NAXEQ8NCW5 288 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 SEMA4DQ92854 862 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 NSMCE3Q96MG7 304 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 NAT9Q9BTE0 207 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 HIPK2Q9H2X6 1198 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 NENFQ9UMX5 172 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 CPDO75976 1380 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 TMEM150CB9EJG8 249 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 CBFA2T3O75081 653 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 CYP1A2P05177 515 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 ATP1A3P13637 1013 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 ATP5A1P25705 553 aaKnown RBP12.69□□□□□ -0.38
TCF4-248ENST00000616053 MAT2AP31153 395 aaKnown RBP12.69□□□□□ -0.38
TCF4-248ENST00000616053 MAP2K5Q13163 448 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 DCST1Q5T197 706 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 SYCE2Q6PIF2 218 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 SYVN1Q86TM6 617 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 CAND1Q86VP6 1230 aaKnown RBP12.69□□□□□ -0.38
TCF4-248ENST00000616053 MIEF2Q96C03 454 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 KLHL4Q9C0H6 718 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 C8orf4Q9NR00 106 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 OSER1Q9NX31 292 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 TRDMT1O14717 391 aaKnown RBP12.69□□□□□ -0.38
TCF4-248ENST00000616053 SLC31A1O15431 190 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 ATMINO43313 823 aaPredicted RBP12.69□□□□□ -0.38
TCF4-248ENST00000616053 CD40LGP29965 261 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 C2orf73Q8N5S3 287 aaPredicted RBP12.69□□□□□ -0.38
TCF4-248ENST00000616053 RNF145Q96MT1 663 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 PLOD3O60568 738 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 FAPQ12884 760 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 SLC8B1Q6J4K2 584 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 DKKL1Q9UK85 242 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 TBX20Q9UMR3 447 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 C1orf232A0A0U1RR37 186 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 C2orf72A6NCS6 295 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 HMGCRP04035 888 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 ITGA2P17301 1181 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 CDC42EP5Q6NZY7 148 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 ZNF567Q8N184 647 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms