RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 EFCAB1Q9HAE3 211 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 EML4Q9HC35 981 aaKnown RBP11.37□□□□□ -0.59
TOP3A-217ENST00000584582 PNPLA8Q9NP80 782 aa11.37□□□□□ -0.59
TOP3A-217ENST00000584582 RNF103-CHMP3A0A140T963 221 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 GPR39O43194 453 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 MAFKO60675 156 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 GMNNO75496 209 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 TGDSO95455 350 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 CHEK2O96017 543 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 ANPEPP15144 967 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 GKP32189 559 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 FASTKQ14296 549 aaKnown RBP11.36□□□□□ -0.59
TOP3A-217ENST00000584582 TRMT5Q32P41 509 aaKnown RBP11.36□□□□□ -0.59
TOP3A-217ENST00000584582 POTEHQ6S545 545 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 OR9I1Q8NGQ6 314 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 YME1L1Q96TA2 773 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 HIPK3Q9H422 1215 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 FBRSL1Q9HCM7 1045 aaKnown RBP11.36□□□□□ -0.59
TOP3A-217ENST00000584582 CASS4Q9NQ75 786 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 TRMT6Q9UJA5 497 aaKnown RBP11.36□□□□□ -0.59
TOP3A-217ENST00000584582 APPL1Q9UKG1 709 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 EMCNQ9ULC0 261 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 PPM1HQ9ULR3 514 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 IQCF5A8MTL0 148 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 TBL1XO60907 577 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 C1RP00736 705 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 APOA4P06727 396 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 LTA4HP09960 611 aaKnown RBP11.36□□□□□ -0.59
TOP3A-217ENST00000584582 TACR2P21452 398 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 CDK7P50613 346 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 NOGQ13253 232 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 MED21Q13503 144 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 RIPK1Q13546 671 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 HECTD3Q5T447 861 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 ASRGL1Q7L266 308 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 OTOP2Q7RTS6 562 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 HS6ST3Q8IZP7 471 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 MAB21L3Q8N8X9 362 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 GDPD5Q8WTR4 605 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.36□□□□□ -0.595e-7■■■■■ 39
TOP3A-217ENST00000584582 SKA1Q96BD8 255 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 MARCH4Q9P2E8 410 aaPredicted RBP11.36□□□□□ -0.59
TOP3A-217ENST00000584582 SUN2Q9UH99 717 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 PCDHB8Q9UN66 801 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 FCF1Q9Y324 198 aaKnown RBP11.36□□□□□ -0.59
TOP3A-217ENST00000584582 RAP2CQ9Y3L5 183 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 PKP3Q9Y446 797 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 UBXN8O00124 270 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 CD3EAPO15446 510 aaKnown RBP11.36□□□□□ -0.59
TOP3A-217ENST00000584582 GOT2P00505 430 aaKnown RBP11.36□□□□□ -0.59
TOP3A-217ENST00000584582 CRABP2P29373 138 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 SCNN1AP37088 669 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 SLC18A1P54219 525 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 ECT2LQ008S8 904 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 DDX39BQ13838 428 aaKnown RBP11.36□□□□□ -0.59
TOP3A-217ENST00000584582 ARMC12Q5T9G4 340 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 ZNF697Q5TEC3 545 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 TAS1R1Q7RTX1 841 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 TMEM173Q86WV6 379 aaPredicted RBP11.36□□□□□ -0.59
TOP3A-217ENST00000584582 BHLHE22Q8NFJ8 381 aaPredicted RBP11.36□□□□□ -0.59
TOP3A-217ENST00000584582 CEP70Q8NHQ1 597 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 MTFMTQ96DP5 389 aaKnown RBP11.36□□□□□ -0.59
TOP3A-217ENST00000584582 SLC45A3Q96JT2 553 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 WDR41Q9HAD4 459 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 PLAC1Q9HBJ0 212 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 CATSPERZQ9NTU4 200 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 EGFL7Q9UHF1 273 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 SH3BP1Q9Y3L3 701 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 MTF2Q9Y483 593 aaPredicted RBP11.36□□□□□ -0.59
TOP3A-217ENST00000584582 PTGDR2Q9Y5Y4 395 aa11.36□□□□□ -0.59
TOP3A-217ENST00000584582 CABYRO75952 493 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 MT-ND1P03886 318 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 CES1P23141 567 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 AKT1P31749 480 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 POU4F1Q01851 419 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 CES4AQ5XG92 561 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 KRT80Q6KB66 452 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 ARL14EPQ8N8R7 260 aaPredicted RBP11.35□□□□□ -0.59
TOP3A-217ENST00000584582 FBXO22Q8NEZ5 403 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 TNKS2Q9H2K2 1166 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 MCM8Q9UJA3 840 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 DNMT3LQ9UJW3 386 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 LOXHD1Q8IVV2 1947 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 CCDC162PA2VCL2 907 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 FFAR3O14843 346 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 GPR42O15529 346 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 ADAM12O43184 909 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 ALDH1A1P00352 501 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 JUNP05412 331 aaKnown RBP11.35□□□□□ -0.59
TOP3A-217ENST00000584582 ACRP10323 421 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 SELPP16109 830 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 ATP5F1P24539 256 aaPredicted RBP11.35□□□□□ -0.59
TOP3A-217ENST00000584582 ADAM17P78536 824 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 DSG1Q02413 1049 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 NIPAL4Q0D2K0 466 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 PPP1R3AQ16821 1122 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 SIRPB2Q5JXA9 342 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 FAM151BQ6UXP7 276 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 DET1Q7L5Y6 550 aa11.35□□□□□ -0.59
TOP3A-217ENST00000584582 EIF2B3Q9NR50 452 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms