RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 C5orf60A6NFR6 353 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 NPIPB15A6NHN6 443 aaPredicted RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 METTL12A8MUP2 240 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 PATE3B3GLJ2 98 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 CES2O00748 559 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 RIOK3O14730 519 aaKnown RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 MAP3K13O43283 966 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 RNGTTO60942 597 aaKnown RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 SOCS5O75159 536 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 GCATO75600 419 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 CPP00450 1065 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 ITGAVP06756 1048 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 ATXN1LP0C7T5 689 aaKnown RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 PIRTP0C851 137 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 TCP1P17987 556 aaKnown RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 ITPKAP23677 461 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 MSNP26038 577 aaKnown RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 OXTRP30559 389 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 CNR2P34972 360 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 RPL22P35268 128 aaKnown RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 MMP12P39900 470 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 DHPSP49366 369 aaPredicted RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 SPARCL1Q14515 664 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 QPCTQ16769 361 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 TMEM259Q4ZIN3 620 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 RALGPS1Q5JS13 557 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 KIAA0895LQ68EN5 471 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 FBXL19Q6PCT2 694 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 DRICH1Q6PGQ1 229 aaPredicted RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 LAYNQ6UX15 382 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 ASCL5Q7RTU5 278 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 TTC7BQ86TV6 843 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 KLHDC8BQ8IXV7 354 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 DCLK2Q8N568 766 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 OR2T34Q8NGX1 318 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 C1orf216Q8TAB5 229 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 FUBP1Q96AE4 644 aaKnown RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 TRIM44Q96DX7 344 aaPredicted RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 PPP1R16AQ96I34 528 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 FCRL5Q96RD9 977 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 DDX47Q9H0S4 455 aaKnown RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 SGK2Q9HBY8 427 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 PCDH9Q9HC56 1237 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 FZD3Q9NPG1 666 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 FSCN3Q9NQT6 498 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 B4GALT6Q9UBX8 382 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 RSPH14Q9UHP6 348 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 EIF2B4Q9UI10 523 aaKnown RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 ZNF148Q9UQR1 794 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 NCKAP1Q9Y2A7 1128 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 NEU2Q9Y3R4 380 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 SPO11Q9Y5K1 396 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 SAR1BQ9Y6B6 198 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 ARHGEF17Q96PE2 2063 aaPredicted RBP9.85□□□□□ -0.83
CLK3-208ENST00000562626 ZNF292O60281 2723 aa9.85□□□□□ -0.83
CLK3-208ENST00000562626 ARID1BQ8NFD5 2236 aaPredicted RBP9.84□□□□□ -0.83
CLK3-208ENST00000562626 SPTBN4Q9H254 2564 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 CHD8Q9HCK8 2581 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 FAM186AA6NE01 2351 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 TBC1D3DA0A087WVF3 549 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 TBC1D3IA0A087WXS9 549 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 TBC1D3EA0A087X179 549 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 TBC1D3KA0A087X1G2 549 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 TBC1D3FA6NER0 549 aaPredicted RBP9.84□□□□□ -0.83
CLK3-208ENST00000562626 IGLON5A6NGN9 336 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 GOLGA8CPA6NN73 597 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 TBC1D3LB9A6J9 549 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 RAD51BO15315 384 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 SLC7A4O43246 635 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 MTSS1O43312 755 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 LATO43561 262 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 AP1G1O43747 822 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 MMP20O60882 483 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 PHF2O75151 1096 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 NDUFS2O75306 463 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 USP12O75317 370 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 NEBLO76041 1014 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 FSBPO95073 299 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 IFNB1P01574 187 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 SERPINF2P08697 491 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 TBC1D3HP0C7X1 549 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 CASQ1P31415 396 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 ADRA1AP35348 466 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 HNF1BP35680 557 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 COILP38432 576 aaPredicted RBP9.84□□□□□ -0.83
CLK3-208ENST00000562626 PTGIRP43119 386 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 ID4P47928 161 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 WNT3AP56704 352 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 GRM3Q14832 879 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 TRIP13Q15645 432 aaPredicted RBP9.84□□□□□ -0.83
CLK3-208ENST00000562626 CDKN3Q16667 212 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 ZNF284Q2VY69 593 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 TMEM52BQ4KMG9 183 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 ARMC12Q5T9G4 340 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 KCTD11Q693B1 232 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 TBC1D3GQ6DHY5 549 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 TBC1D3CQ6IPX1 549 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 BRAT1Q6PJG6 821 aa9.84□□□□□ -0.83
CLK3-208ENST00000562626 ZC3H14Q6PJT7 736 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms