RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 MYL4P12829 197 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 SP100P23497 879 aaPredicted RBP11.71□□□□□ -0.53
PCAT1-202ENST00000561978 YBEYP58557 167 aaPredicted RBP11.71□□□□□ -0.53
PCAT1-202ENST00000561978 ABCE1P61221 599 aaKnown RBP11.71□□□□□ -0.53
PCAT1-202ENST00000561978 TNK2Q07912 1038 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 TWF1Q12792 350 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 ILF2Q12905 390 aaKnown RBP11.71□□□□□ -0.53
PCAT1-202ENST00000561978 TAF10Q12962 218 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 THOC5Q13769 683 aaKnown RBP11.71□□□□□ -0.53
PCAT1-202ENST00000561978 POU6F1Q14863 301 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 LEXMQ3ZCV2 418 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 PARP15Q460N3 678 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 C10orf120Q5SQS8 335 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 WASHC2DQ5SRD0 308 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 CES5AQ6NT32 575 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 CCDC149Q6ZUS6 474 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 CLEC14AQ86T13 490 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 C10orf107Q8IVU9 208 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.71□□□□□ -0.53
PCAT1-202ENST00000561978 ARHGAP24Q8N264 748 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 SP110Q9HB58 689 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 NMRAL1Q9HBL8 299 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 CD248Q9HCU0 757 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 FBXO6Q9NRD1 293 aaPredicted RBP11.71□□□□□ -0.53
PCAT1-202ENST00000561978 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.71□□□□□ -0.53
PCAT1-202ENST00000561978 HCFC1R1Q9NWW0 138 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 YIPF1Q9Y548 306 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 NOTCH4Q99466 2003 aa11.71□□□□□ -0.54
PCAT1-202ENST00000561978 HEATR9A2RTY3 570 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 TMEM114B3SHH9 223 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 GYG2O15488 501 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 MBTPS2O43462 519 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 SIN3BO75182 1162 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 C1RP00736 705 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 LRG1P02750 347 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 SERPINA6P08185 405 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 HARS2P49590 506 aaKnown RBP11.7□□□□□ -0.54
PCAT1-202ENST00000561978 LSM11P83369 360 aaKnown RBP eCLIP11.7□□□□□ -0.54
PCAT1-202ENST00000561978 SLC12A1Q13621 1099 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 CES4AQ5XG92 561 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 KIAA0930Q6ICG6 404 aaPredicted RBP11.7□□□□□ -0.54
PCAT1-202ENST00000561978 ELMSAN1Q6PJG2 1045 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 ZCCHC23Q6ZST2 131 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 RAPH1Q70E73 1250 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 CMC1Q7Z7K0 106 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 ZC3HC1Q86WB0 502 aaKnown RBP11.7□□□□□ -0.54
PCAT1-202ENST00000561978 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.7□□□□□ -0.54
PCAT1-202ENST00000561978 CALML6Q8TD86 181 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 SMG7Q92540 1137 aaKnown RBP11.7□□□□□ -0.54
PCAT1-202ENST00000561978 UTP4Q969X6 686 aaKnown RBP11.7□□□□□ -0.54
PCAT1-202ENST00000561978 IMP4Q96G21 291 aaKnown RBP11.7□□□□□ -0.54
PCAT1-202ENST00000561978 ATXN7L3BQ96GX2 97 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 MRGPRX2Q96LB1 330 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 RANBP9Q96S59 729 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 FAM167BQ9BTA0 163 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 IRF2BPLQ9H1B7 796 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 PIDD1Q9HB75 910 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 ARL8BQ9NVJ2 186 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 ZDHHC7Q9NXF8 308 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 SUN2Q9UH99 717 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 APOBEC2Q9Y235 224 aaKnown RBP11.7□□□□□ -0.54
PCAT1-202ENST00000561978 DNAJC16Q9Y2G8 782 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 MYO10Q9HD67 2058 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 DOCK8Q8NF50 2099 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 SLC12A8A0AV02 714 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 KLHL2O95198 593 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 VAPBO95292 243 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 IGLV3-27P01718 113 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 AHSGP02765 367 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 PRKCGP05129 697 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 ATF6P18850 670 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 CRABP2P29373 138 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 ARCN1P48444 511 aaKnown RBP11.7□□□□□ -0.54
PCAT1-202ENST00000561978 MAPKAPK2P49137 400 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 WNT3AP56704 352 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 NTHL1P78549 312 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 IL10RBQ08334 325 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 LAMB3Q13751 1172 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 USP10Q14694 798 aaKnown RBP11.7□□□□□ -0.54
PCAT1-202ENST00000561978 CBX2Q14781 532 aaPredicted RBP11.7□□□□□ -0.54
PCAT1-202ENST00000561978 POLD3Q15054 466 aaPredicted RBP11.7□□□□□ -0.54
PCAT1-202ENST00000561978 KIAA0408Q6ZU52 694 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 GRASPQ7Z6J2 395 aaPredicted RBP11.7□□□□□ -0.54
PCAT1-202ENST00000561978 GPR149Q86SP6 731 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 TEX26Q8N6G2 289 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 OR6Y1Q8NGX8 325 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 AZIN2Q96A70 460 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 C20orf27Q9GZN8 174 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 NMUR2Q9GZQ4 415 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 MMADHCQ9H3L0 296 aaPredicted RBP11.7□□□□□ -0.54
PCAT1-202ENST00000561978 NOL6Q9H6R4 1146 aaKnown RBP11.7□□□□□ -0.54
PCAT1-202ENST00000561978 SLC39A10Q9ULF5 831 aa11.7□□□□□ -0.54
PCAT1-202ENST00000561978 TRIM13O60858 407 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 RAMP2O60895 175 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 PAPSS2O95340 614 aaPredicted RBP11.69□□□□□ -0.54
PCAT1-202ENST00000561978 PEX11BO96011 259 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 LMNAP02545 664 aaKnown RBP11.69□□□□□ -0.54
PCAT1-202ENST00000561978 ZDHHC11BP0C7U3 371 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 MAGEA8P43361 318 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 ALDH1A3P47895 512 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms