RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 TPD52L1Q16890 204 aaPredicted RBP13.23□□□□□ -0.29
XRCC3-212ENST00000555231 SMYD5Q6GMV2 418 aa13.23□□□□□ -0.29
XRCC3-212ENST00000555231 ATG14Q6ZNE5 492 aa13.23□□□□□ -0.29
XRCC3-212ENST00000555231 ARCQ7LC44 396 aa13.23□□□□□ -0.29
XRCC3-212ENST00000555231 TMPRSS9Q7Z410 1059 aa13.23□□□□□ -0.29
XRCC3-212ENST00000555231 PYROXD2Q8N2H3 581 aa13.23□□□□□ -0.29
XRCC3-212ENST00000555231 GPR156Q8NFN8 814 aa13.23□□□□□ -0.29
XRCC3-212ENST00000555231 SLC20A1Q8WUM9 679 aa13.23□□□□□ -0.29
XRCC3-212ENST00000555231 USP7Q93009 1102 aa13.23□□□□□ -0.29
XRCC3-212ENST00000555231 WDR92Q96MX6 357 aa13.23□□□□□ -0.29
XRCC3-212ENST00000555231 NCAPGQ9BPX3 1015 aa13.23□□□□□ -0.29
XRCC3-212ENST00000555231 NDST4Q9H3R1 872 aa13.23□□□□□ -0.29
XRCC3-212ENST00000555231 NOL6Q9H6R4 1146 aaKnown RBP13.23□□□□□ -0.29
XRCC3-212ENST00000555231 MRPL40Q9NQ50 206 aaKnown RBP13.23□□□□□ -0.29
XRCC3-212ENST00000555231 DKK3Q9UBP4 350 aa13.23□□□□□ -0.29
XRCC3-212ENST00000555231 LHX3Q9UBR4 397 aa13.23□□□□□ -0.29
XRCC3-212ENST00000555231 PCDHGA4Q9Y5G9 962 aa13.23□□□□□ -0.29
XRCC3-212ENST00000555231 ZFC3H1O60293 1989 aaKnown RBP13.22□□□□□ -0.29
XRCC3-212ENST00000555231 LSM8O95777 96 aaKnown RBP13.22□□□□□ -0.29
XRCC3-212ENST00000555231 ITGB2P05107 769 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 ZFP36L1Q07352 338 aaKnown RBP13.22□□□□□ -0.29
XRCC3-212ENST00000555231 ELP6Q0PNE2 266 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 CYTH1Q15438 398 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 TBR1Q16650 682 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 VWA3BQ502W6 1294 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 MIIPQ5JXC2 388 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 KLHDC7AQ5VTJ3 777 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 XKR5Q6UX68 686 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 TAF8Q7Z7C8 310 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 PLA2G15Q8NCC3 412 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 FAM46DQ8NEK8 389 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 OR6C4Q8NGE1 309 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 HTR3CQ8WXA8 447 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 JPH3Q8WXH2 748 aaPredicted RBP13.22□□□□□ -0.29
XRCC3-212ENST00000555231 OR1E3Q8WZA6 343 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 HMCESQ96FZ2 354 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 RBM15Q96T37 977 aaKnown RBP eCLIP13.22□□□□□ -0.29
XRCC3-212ENST00000555231 C11orf70Q9BRQ4 267 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 PCDH12Q9NPG4 1184 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 SEPT10Q9P0V9 454 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 KIAA1468Q9P260 1216 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 MFHAS1Q9Y4C4 1052 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 DAAM1Q9Y4D1 1078 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 RNF215Q9Y6U7 377 aa13.22□□□□□ -0.29
XRCC3-212ENST00000555231 PTPN13Q12923 2485 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 SDK2Q58EX2 2172 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 TMEM202A6NGA9 273 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 ZSCAN5CA6NGD5 496 aaPredicted RBP13.21□□□□□ -0.29
XRCC3-212ENST00000555231 C2CD4BA6NLJ0 364 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 B4DGG1 531 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 C9orf172C9J069 976 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 RASA4BC9J798 803 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 PES1O00541 588 aaKnown RBP13.21□□□□□ -0.29
XRCC3-212ENST00000555231 RASA4O43374 803 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 SUV39H1O43463 412 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 GLB1P16278 677 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 LIG3P49916 1009 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 HDAC4P56524 1084 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 UGP2Q16851 508 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 INO80DQ53TQ3 878 aaPredicted RBP13.21□□□□□ -0.29
XRCC3-212ENST00000555231 COLEC12Q5KU26 742 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 PHF19Q5T6S3 580 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 STRADAQ7RTN6 431 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 SPRED1Q7Z699 444 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 ZSWIM9Q86XI8 627 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 RTL3Q8N8U3 475 aaKnown RBP13.21□□□□□ -0.29
XRCC3-212ENST00000555231 CCL4L1Q8NHW4 92 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 SLC30A5Q8TAD4 765 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 EPS8L1Q8TE68 723 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 FAM172AQ8WUF8 416 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 CASKIN2Q8WXE0 1202 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 NAA15Q9BXJ9 866 aaKnown RBP13.21□□□□□ -0.29
XRCC3-212ENST00000555231 SEMA6CQ9H3T2 930 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 SUV39H2Q9H5I1 410 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 RETREG1Q9H6L5 497 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 FGF22Q9HCT0 170 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 LRIT1Q9P2V4 623 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 MOSPD1Q9UJG1 213 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 APPL1Q9UKG1 709 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 PCDHB11Q9Y5F2 797 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 DOPEY2Q9Y3R5 2298 aa13.21□□□□□ -0.29
XRCC3-212ENST00000555231 BSNQ9UPA5 3926 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 UCHL3P15374 230 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 EPHB2P29323 1055 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 PTPN9P43378 593 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 SRSF1Q07955 248 aaKnown RBP eCLIP13.2□□□□□ -0.3
XRCC3-212ENST00000555231 MTM1Q13496 603 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 ARHGEF7Q14155 803 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 CLCA4Q14CN2 919 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 C16orf72Q14CZ0 275 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 C14orf28Q4W4Y0 310 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 CERCAMQ5T4B2 595 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 OGFOD3Q6PK18 319 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 SLITRK4Q8IW52 837 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 ZSCAN1Q8NBB4 408 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 ATL2Q8NHH9 583 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 FUBP1Q96AE4 644 aaKnown RBP13.2□□□□□ -0.3
XRCC3-212ENST00000555231 CMKLR1Q99788 373 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 TUBGCP2Q9BSJ2 902 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 TMEM168Q9H0V1 697 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms