RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 SAP25Q8TEE9 199 aa11.96□□□□□ -0.49
YBX3-217ENST00000546164 CENPTQ96BT3 561 aa11.96□□□□□ -0.49
YBX3-217ENST00000546164 IFT43Q96FT9 208 aa11.96□□□□□ -0.49
YBX3-217ENST00000546164 ZNF830Q96NB3 372 aaPredicted RBP11.96□□□□□ -0.49
YBX3-217ENST00000546164 OLFM3Q96PB7 478 aa11.96□□□□□ -0.49
YBX3-217ENST00000546164 MYOCQ99972 504 aa11.96□□□□□ -0.49
YBX3-217ENST00000546164 C1QTNF7Q9BXJ2 289 aa11.96□□□□□ -0.49
YBX3-217ENST00000546164 MAK16Q9BXY0 300 aaKnown RBP11.96□□□□□ -0.49
YBX3-217ENST00000546164 POLR1EQ9GZS1 481 aaKnown RBP11.96□□□□□ -0.49
YBX3-217ENST00000546164 BRD8Q9H0E9 1235 aa11.96□□□□□ -0.49
YBX3-217ENST00000546164 GOLPH3Q9H4A6 298 aa11.96□□□□□ -0.49
YBX3-217ENST00000546164 NOD2Q9HC29 1040 aa11.96□□□□□ -0.49
YBX3-217ENST00000546164 FZD3Q9NPG1 666 aa11.96□□□□□ -0.49
YBX3-217ENST00000546164 HAUS2Q9NVX0 235 aa11.96□□□□□ -0.49
YBX3-217ENST00000546164 CHD8Q9HCK8 2581 aa11.96□□□□□ -0.5
YBX3-217ENST00000546164 POM121BA6NF01 834 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 GOLGA6L6A8MZA4 724 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 TOR1BO14657 336 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 FPGTO14772 594 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 MMP20O60882 483 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 CCNB1P14635 433 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 PMLP29590 882 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 RABIFP47224 123 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 NR2C2P49116 596 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 CLDN2P57739 230 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 GSDMDP57764 484 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 PFN3P60673 137 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 MAXP61244 160 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 IFI35P80217 286 aaPredicted RBP11.95□□□□□ -0.5
YBX3-217ENST00000546164 RALGDSQ12967 914 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 TFDP2Q14188 446 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 PDK1Q15118 436 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 ODF2Q5BJF6 829 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 PRAMEF14Q5SWL7 426 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 Q6ZSR6 202 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 DPPA4Q7L190 304 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 DAAM2Q86T65 1068 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 SLC22A18ASQ8N1D0 253 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 TXLNBQ8N3L3 684 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 SPC24Q8NBT2 197 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 ACRBPQ8NEB7 543 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 EXD1Q8NHP7 514 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 RNF25Q96BH1 459 aaPredicted RBP11.95□□□□□ -0.5
YBX3-217ENST00000546164 CAMK1GQ96NX5 476 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 IL12RB2Q99665 862 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 SEMA3CQ99985 751 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 LACRTQ9GZZ8 138 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 NT5MQ9NPB1 228 aa11.95□□□□□ -0.5
YBX3-217ENST00000546164 RBM22Q9NW64 420 aaKnown RBP eCLIP11.95□□□□□ -0.5
YBX3-217ENST00000546164 TTC24A2A3L6 582 aaPredicted RBP11.94□□□□□ -0.5
YBX3-217ENST00000546164 PPP1R12AO14974 1030 aaPredicted RBP11.94□□□□□ -0.5
YBX3-217ENST00000546164 FZD6O60353 706 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 ZRANB2O95218 330 aaKnown RBP eCLIP11.94□□□□□ -0.5
YBX3-217ENST00000546164 PGLSO95336 258 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 C6P13671 934 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 TNNT1P13805 278 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 CTNNA1P35221 906 aaKnown RBP11.94□□□□□ -0.5
YBX3-217ENST00000546164 MARCKSL1P49006 195 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 LIG3P49916 1009 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 FAM193AP78312 1265 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 SIM1P81133 766 aaPredicted RBP11.94□□□□□ -0.5
YBX3-217ENST00000546164 SHC2P98077 582 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 TRAF2Q12933 501 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 TRIP6Q15654 476 aaKnown RBP11.94□□□□□ -0.5
YBX3-217ENST00000546164 PPP2R5EQ16537 467 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 TFDP3Q5H9I0 405 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 SPOCD1Q6ZMY3 1216 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 BZW1Q7L1Q6 419 aaKnown RBP11.94□□□□□ -0.5
YBX3-217ENST00000546164 KANSL1Q7Z3B3 1105 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 RFX6Q8HWS3 928 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 RCOR2Q8IZ40 523 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 LRRC57Q8N9N7 239 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 TP53I13Q8NBR0 393 aaPredicted RBP11.94□□□□□ -0.5
YBX3-217ENST00000546164 CCNYQ8ND76 341 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 ARRDC2Q8TBH0 407 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 SETD7Q8WTS6 366 aaKnown RBP11.94□□□□□ -0.5
YBX3-217ENST00000546164 RBM41Q96IZ5 413 aaKnown RBP11.94□□□□□ -0.5
YBX3-217ENST00000546164 MCCC1Q96RQ3 725 aaPredicted RBP11.94□□□□□ -0.5
YBX3-217ENST00000546164 LGMNQ99538 433 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 CDC6Q99741 560 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 WRAP53Q9BUR4 548 aaKnown RBP11.94□□□□□ -0.5
YBX3-217ENST00000546164 PHTF1Q9UMS5 762 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 BTBD3Q9Y2F9 522 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.94□□□□□ -0.5
YBX3-217ENST00000546164 PPIL1Q9Y3C6 166 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 PCDHB9Q9Y5E1 797 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 PCDHGC4Q9Y5F7 938 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 PCDHA3Q9Y5H8 950 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 HEY1Q9Y5J3 304 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 DUSP10Q9Y6W6 482 aa11.94□□□□□ -0.5
YBX3-217ENST00000546164 SPEGQ15772 3267 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 hCG_1818297A0A087WSY0 165 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 SPTY2D1-AS1A0A0U1RR47 76 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 SPAARA0A1B0GVQ0 90 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 TRIM16O95361 564 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 CPP00450 1065 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 PRKCGP05129 697 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 HLA-DQB2P05538 268 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 ITGAVP06756 1048 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 TGM2P21980 687 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms