RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 TEPSINQ96N21 525 aa9.09□□□□□ -0.95
MTHFD1-202ENST00000545908 CSPG4P5Q96PW8 444 aa9.09□□□□□ -0.95
MTHFD1-202ENST00000545908 GBA3Q9H227 469 aa9.09□□□□□ -0.95
MTHFD1-202ENST00000545908 SEMA4AQ9H3S1 761 aa9.09□□□□□ -0.95
MTHFD1-202ENST00000545908 KLHL20Q9Y2M5 609 aa9.09□□□□□ -0.95
MTHFD1-202ENST00000545908 SLC28A1O00337 649 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 FPGTO14772 594 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 F2P00734 622 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 CFIP05156 583 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 CNPP09543 421 aaKnown RBP9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 CCR4P51679 360 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 IRF8Q02556 426 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 SLC20A2Q08357 652 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 TRIM32Q13049 653 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 IRF2BP2Q7Z5L9 587 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 BEND7Q8N7W2 519 aaPredicted RBP9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 PCDHB18PQ96TA0 734 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 PRKAG3Q9UGI9 489 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 KLHL3Q9UH77 587 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 NPEPPSL1A6NEC2 478 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 ASLP04424 464 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 ADRA1BP35368 520 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 XKR4Q5GH76 650 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 UNC5AQ6ZN44 842 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 UBE2R2Q712K3 238 aaPredicted RBP9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 SRLQ86TD4 932 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 TCP10LQ8TDR4 215 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 FUBP3Q96I24 572 aaKnown RBP eCLIP9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 GDF3Q9NR23 364 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 SIRPGQ9P1W8 387 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 TRBV23OR9-2A0A075B6M9 112 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 WNT3AP56704 352 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 RAB10P61026 200 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 MRPS15P82914 257 aaKnown RBP9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 AUHQ13825 339 aaKnown RBP9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 FASTKQ14296 549 aaKnown RBP9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 ALG11Q2TAA5 492 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 BNC2Q6ZN30 1099 aaPredicted RBP9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 RIN3Q8TB24 985 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 P2RY11Q96G91 374 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 KLHL32Q96NJ5 620 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 FBXW11Q9UKB1 542 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 TLR6Q9Y2C9 796 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 UQCRBP14927 111 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 DAOAP59103 153 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 COL9A3Q14050 684 aaPredicted RBP9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 TJAP1Q5JTD0 557 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 TAPT1Q6NXT6 567 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 PARGQ86W56 976 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 C2orf73Q8N5S3 287 aaPredicted RBP9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 OR7D4Q8NG98 312 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 PXYLP1Q8TE99 480 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 COPS8Q99627 209 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 MAGEH1Q9H213 219 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 XPNPEP1Q9NQW7 623 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 IMPAD1Q9NX62 359 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 RCOR3Q9P2K3 495 aaPredicted RBP9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 PCDHGC5Q9Y5F6 944 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 C16orf96A6NNT2 1141 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 HGFP14210 728 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 PTPN9P43378 593 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 CDK7P50613 346 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 WDR93Q6P2C0 686 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 SCAMP5Q8TAC9 235 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 FIG4Q92562 907 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 CCT7Q99832 543 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 TLR10Q9BXR5 811 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 DZANK1Q9NVP4 752 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 STRCQ7RTU9 1775 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 INSIG1O15503 277 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 TRIM13O60858 407 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 TM7SF2O76062 418 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 CCT8P50990 548 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 CHRNB3Q05901 458 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 CACNG1Q06432 222 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 DMTNQ08495 405 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 SF1Q15637 639 aaKnown RBP9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 PDE12Q6L8Q7 609 aaKnown RBP9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 PRMT9Q6P2P2 845 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 IYDQ6PHW0 289 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 TMC3Q7Z5M5 1100 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 CYB5D2Q8WUJ1 264 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 KLK6Q92876 244 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 ZNF780BQ9Y6R6 833 aa9.08□□□□□ -0.96
MTHFD1-202ENST00000545908 TMEM191CA6NGB0 347 aa9.07□□□□□ -0.96
MTHFD1-202ENST00000545908 PRMT3O60678 531 aa9.07□□□□□ -0.96
MTHFD1-202ENST00000545908 EPN2O95208 641 aa9.07□□□□□ -0.96
MTHFD1-202ENST00000545908 MLYCDO95822 493 aa9.07□□□□□ -0.96
MTHFD1-202ENST00000545908 CHRNA1P02708 482 aa9.07□□□□□ -0.96
MTHFD1-202ENST00000545908 GJA1P17302 382 aa9.07□□□□□ -0.96
MTHFD1-202ENST00000545908 BMP6P22004 513 aa9.07□□□□□ -0.96
MTHFD1-202ENST00000545908 KRT74Q7RTS7 529 aa9.07□□□□□ -0.96
MTHFD1-202ENST00000545908 ZNF398Q8TD17 642 aa9.07□□□□□ -0.96
MTHFD1-202ENST00000545908 MRPL48Q96GC5 212 aaKnown RBP9.07□□□□□ -0.96
MTHFD1-202ENST00000545908 PSME2Q9UL46 239 aa9.07□□□□□ -0.96
MTHFD1-202ENST00000545908 SLC12A4Q9UP95 1085 aa9.07□□□□□ -0.96
MTHFD1-202ENST00000545908 NRAPQ86VF7 1730 aa9.07□□□□□ -0.96
MTHFD1-202ENST00000545908 H0Y858 1186 aa9.07□□□□□ -0.96
MTHFD1-202ENST00000545908 KIF1CO43896 1103 aaKnown RBP9.07□□□□□ -0.96
MTHFD1-202ENST00000545908 KCNH1O95259 989 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms