RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 SLC44A3Q8N4M1 653 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 LPCAT1Q8NF37 534 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 DTX3LQ8TDB6 740 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 ZNF669Q96BR6 464 aaPredicted RBP11.86□□□□□ -0.51
VTN-202ENST00000539746 TSPAN17Q96FV3 270 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 CERS2Q96G23 380 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 VPS39Q96JC1 886 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 ZIM3Q96PE6 472 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 LYSMD1Q96S90 227 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 C1QTNF7Q9BXJ2 289 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 TM6SF2Q9BZW4 377 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 IQCGQ9H095 443 aaKnown RBP11.86□□□□□ -0.51
VTN-202ENST00000539746 CCDC68Q9H2F9 335 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 ZDHHC6Q9H6R6 413 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 UBP1Q9NZI7 540 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 PKD2L2Q9NZM6 624 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 OGFRQ9NZT2 677 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 INTS6Q9UL03 887 aaKnown RBP11.86□□□□□ -0.51
VTN-202ENST00000539746 PCDHB9Q9Y5E1 797 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.86□□□□□ -0.51
VTN-202ENST00000539746 PIAS3Q9Y6X2 628 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 CHD9Q3L8U1 2897 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 TCRBV7S3A2A0A539 114 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 TCRBV9S1A1TA0A576 114 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 GRXCR2A6NFK2 248 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 CAPN8A6NHC0 703 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 C2CD4DB7Z1M9 353 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 H3BMM5 538 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 QSOX1O00391 747 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 RPP40O75818 363 aaKnown RBP11.85□□□□□ -0.51
VTN-202ENST00000539746 MMP2P08253 660 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 SNRPAP09012 282 aaKnown RBP11.85□□□□□ -0.51
VTN-202ENST00000539746 KRT15P19012 456 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 GLDCP23378 1020 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 ITGB7P26010 798 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 PMLP29590 882 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 NTSR1P30989 418 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 CTHP32929 405 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 HMGCLP35914 325 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 GP5P40197 560 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 MAGEA9P43362 315 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 SLC12A2P55011 1212 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 KDSRQ06136 332 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 ITGA9Q13797 1035 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 POU6F1Q14863 301 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 GEN1Q17RS7 908 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 GPR33Q49SQ1 333 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 UNC5AQ6ZN44 842 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 TPRG1Q6ZUI0 275 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 MARK2Q7KZI7 788 aaKnown RBP11.85□□□□□ -0.51
VTN-202ENST00000539746 PRUNE1Q86TP1 453 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 KBTBD6Q86V97 674 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 KCNMB4Q86W47 210 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 RASSF3Q86WH2 238 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 HOMEZQ8IX15 550 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 CBARPQ8N350 705 aaPredicted RBP11.85□□□□□ -0.51
VTN-202ENST00000539746 PGBD5Q8N414 524 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 SLC25A41Q8N5S1 370 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 OTUD6BQ8N6M0 293 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 ZNF513Q8N8E2 541 aaPredicted RBP11.85□□□□□ -0.51
VTN-202ENST00000539746 OR52K2Q8NGK3 314 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 WFDC5Q8TCV5 224 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 BLOC1S5Q8TDH9 187 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 ACMSDQ8TDX5 336 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 FBF1Q8TES7 1133 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 PTPRN2Q92932 1015 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 ULK4Q96C45 1275 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 ECHDC3Q96DC8 303 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 RSPRY1Q96DX4 576 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 SCRN2Q96FV2 425 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 RPL10LQ96L21 214 aaKnown RBP11.85□□□□□ -0.51
VTN-202ENST00000539746 SMC6Q96SB8 1091 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 TSSK1BQ9BXA7 367 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 CENPHQ9H3R5 247 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 SSU72Q9NP77 194 aaKnown RBP11.85□□□□□ -0.51
VTN-202ENST00000539746 C20orf96Q9NUD7 363 aaPredicted RBP11.85□□□□□ -0.51
VTN-202ENST00000539746 INTS10Q9NVR2 710 aaKnown RBP11.85□□□□□ -0.51
VTN-202ENST00000539746 SYBUQ9NX95 663 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 MOCS1Q9NZB8 636 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 THEGQ9P2T0 379 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 LGALS13Q9UHV8 139 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 SMG5Q9UPR3 1016 aaKnown RBP11.85□□□□□ -0.51
VTN-202ENST00000539746 SORCS3Q9UPU3 1222 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 NCKAP1Q9Y2A7 1128 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 PPIL1Q9Y3C6 166 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 SLC30A1Q9Y6M5 507 aa11.85□□□□□ -0.51
VTN-202ENST00000539746 A0A0J9YYE9 177 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 CCDC189A1A4V9 331 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 TSPAN11A1L157 253 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 MROH6A6NGR9 719 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 FAM159BA6NKW6 160 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 ARNTLO00327 626 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 TRBC1P01850 177 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 EPHX1P07099 455 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 RALBP11234 206 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 ITGALP20701 1170 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 OGNP20774 298 aaKnown RBP11.84□□□□□ -0.51
VTN-202ENST00000539746 OPRD1P41143 372 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 ZNF844Q08AG5 666 aa11.84□□□□□ -0.51
VTN-202ENST00000539746 SPARCL1Q14515 664 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms