RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 EIF3LQ9Y262 564 aaKnown RBP10.76□□□□□ -0.69
RTN3-208ENST00000537981 PCDHA1Q9Y5I3 950 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 V9GYQ6 96 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 HAT1O14929 419 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 HSPA1AP0DMV8 641 aaKnown RBP10.76□□□□□ -0.69
RTN3-208ENST00000537981 HSPA1BP0DMV9 641 aaKnown RBP10.76□□□□□ -0.69
RTN3-208ENST00000537981 EIF2DP41214 584 aaKnown RBP10.76□□□□□ -0.69
RTN3-208ENST00000537981 GP2P55259 537 aaKnown RBP10.76□□□□□ -0.69
RTN3-208ENST00000537981 TRIM71Q2Q1W2 868 aaKnown RBP10.76□□□□□ -0.69
RTN3-208ENST00000537981 QRICH1Q2TAL8 776 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 TBCELQ5QJ74 424 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 CCDC103Q8IW40 242 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 SPARTQ8N0X7 666 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 LSMEM2Q8N112 164 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 PQLC3Q8N755 202 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 MINDY2Q8NBR6 621 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 PDPRQ8NCN5 879 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 FBXL13Q8NEE6 735 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 OR9I1Q8NGQ6 314 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 SLC22A17Q8WUG5 538 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 JPH3Q8WXH2 748 aaPredicted RBP10.76□□□□□ -0.69
RTN3-208ENST00000537981 SEPT8Q92599 483 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 OMA1Q96E52 524 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 YME1L1Q96TA2 773 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 WDR18Q9BV38 432 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 ADNPQ9H2P0 1102 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 TMEM206Q9H813 350 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 LRRC40Q9H9A6 602 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 CAB39LQ9H9S4 337 aa10.76□□□□□ -0.69
RTN3-208ENST00000537981 SUCOQ9UBS9 1254 aaKnown RBP10.76□□□□□ -0.69
RTN3-208ENST00000537981 FAM221BA6H8Z2 402 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 ZBTB5O15062 677 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 PAPSS1O43252 624 aaPredicted RBP10.75□□□□□ -0.69
RTN3-208ENST00000537981 MTRF1O75570 445 aaKnown RBP10.75□□□□□ -0.69
RTN3-208ENST00000537981 TOMM70O94826 608 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 GSTM1P09488 218 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 PTPN5P54829 565 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 NCS1P62166 190 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 TRPC3Q13507 836 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 LAMC2Q13753 1193 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 GLRA4Q5JXX5 417 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 LIN9Q5TKA1 542 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 BROXQ5VW32 411 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 ANKRD34AQ69YU3 496 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 DARS2Q6PI48 645 aaKnown RBP10.75□□□□□ -0.69
RTN3-208ENST00000537981 TMEM270Q6UE05 265 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 C16orf86Q6ZW13 317 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 RFX6Q8HWS3 928 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 LINC00116Q8NCU8 138 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 ACVR1CQ8NER5 493 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 OR6Q1Q8NGQ2 317 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 CDHR1Q96JP9 859 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 DEPDC7Q96QD5 511 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 GATA5Q9BWX5 397 aaPredicted RBP10.75□□□□□ -0.69
RTN3-208ENST00000537981 BEX2Q9BXY8 128 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 ADAMTS10Q9H324 1103 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 IL1RL2Q9HB29 575 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 MTMR10Q9NXD2 777 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 PKD2L1Q9P0L9 805 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 VWA7Q9Y334 891 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 FIS1Q9Y3D6 152 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 CCDC85CA6NKD9 419 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 SNTNA6NMZ2 147 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 C9JVG2 144 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 G3V2L1 256 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 POLR1CO15160 346 aaPredicted RBP10.75□□□□□ -0.69
RTN3-208ENST00000537981 SLC16A4O15374 487 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 PIP5K1CO60331 668 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 CYP19A1P11511 503 aaPredicted RBP10.75□□□□□ -0.69
RTN3-208ENST00000537981 POLR2CP19387 275 aaPredicted RBP10.75□□□□□ -0.69
RTN3-208ENST00000537981 AGXTP21549 392 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 CTHP32929 405 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 CAPGP40121 348 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 OR3A3P47888 321 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 CDC20Q12834 499 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 EIF2B5Q13144 721 aaKnown RBP10.75□□□□□ -0.69
RTN3-208ENST00000537981 COLEC12Q5KU26 742 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 LGSNQ5TDP6 509 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 SLX4IPQ5VYV7 408 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 TXNDC11Q6PKC3 985 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 C16orf54Q6UWD8 224 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 CATSPER4Q7RTX7 472 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 CAMK1DQ8IU85 385 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 BRSK2Q8IWQ3 736 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 EMC1Q8N766 993 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 ANGPTL6Q8NI99 470 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 ZNF516Q92618 1163 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 RPL3LQ92901 407 aaKnown RBP10.75□□□□□ -0.69
RTN3-208ENST00000537981 HSFY1Q96LI6 401 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 TUBA1CQ9BQE3 449 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 PRRG3Q9BZD7 231 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 ARMC1Q9NVT9 282 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 GMIPQ9P107 970 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 RAD54BQ9Y620 910 aa10.75□□□□□ -0.69
RTN3-208ENST00000537981 PLIN4Q96Q06 1357 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 A0A1W2PRQ8 180 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 SYCE1LA8MT33 242 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 C6orf229H3BNL8 230 aa10.74□□□□□ -0.69
RTN3-208ENST00000537981 DDX39AO00148 427 aaKnown RBP10.74□□□□□ -0.69
RTN3-208ENST00000537981 GLRA3O75311 464 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms