RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 SLC28A2O43868 658 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 ERLIN1O75477 346 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 CLDN11O75508 207 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 GCATO75600 419 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 LEFTY1O75610 366 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 CD160O95971 181 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 ERBB2P04626 1255 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 ATP1A1P05023 1023 aaKnown RBP8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 NME1P15531 152 aaKnown RBP8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 GNA15P30679 374 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 AKT2P31751 481 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 GKP32189 559 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 SOX5P35711 763 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 ABL2P42684 1182 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 UCNP55089 124 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 CDH4P55283 916 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 NFKB2Q00653 900 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 PTK2Q05397 1052 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 NME3Q13232 169 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 ZNF177Q13360 481 aaPredicted RBP8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 C1orf61Q13536 156 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 LINC00303Q3SY05 128 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 ZCCHC8Q6NZY4 707 aaKnown RBP8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 C22orf39Q6P5X5 142 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 FOXR1Q6PIV2 292 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 OLFML1Q6UWY5 402 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 KYAT3Q6YP21 454 aaKnown RBP8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 UBE2Q2Q8WVN8 375 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 RNF34Q969K3 372 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 IFT43Q96FT9 208 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 MED8Q96G25 268 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 CALR3Q96L12 384 aaKnown RBP8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 HDAC8Q9BY41 377 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 PARD6BQ9BYG5 372 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 SLC17A9Q9BYT1 436 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 TRIM4Q9C037 500 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 ABCG4Q9H172 646 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 MUC3BQ9H195 1237 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 CLMPQ9H6B4 373 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 ARFGAP3Q9NP61 516 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 UBE2TQ9NPD8 197 aaPredicted RBP8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 THSD1Q9NS62 852 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 PIGVQ9NUD9 493 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 MPP6Q9NZW5 540 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 ZNF212Q9UDV6 495 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 IL36AQ9UHA7 158 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 DNAJC12Q9UKB3 198 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 RAB21Q9UL25 225 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 SNX12Q9UMY4 172 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 ITM2BQ9Y287 266 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 HYOU1Q9Y4L1 999 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 FADS3Q9Y5Q0 445 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 FHOD1Q9Y613 1164 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 HS3ST3A1Q9Y663 406 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 DUSP10Q9Y6W6 482 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 A0A087X0T9 212 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 A0A0A6YYK5 440 aaPredicted RBP8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 CAPN8A6NHC0 703 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 DRGXA6NNA5 263 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 ANKRD36A6QL64 1941 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 M0QYT0 321 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 AQP9O43315 295 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 NOBOXO60393 691 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 ZMPSTE24O75844 475 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 ZRANB2O95218 330 aaKnown RBP eCLIP8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 WISP1O95388 367 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 RHOCP08134 193 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 CELA2BP08218 269 aaPredicted RBP8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 FAM228BP0C875 321 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 ALPPL2P10696 532 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 ADRB3P13945 408 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 PAFAH1B1P43034 410 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 OXCT1P55809 520 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 HNRNPKP61978 463 aaKnown RBP eCLIP8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 ARF5P84085 180 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 PDE1CQ14123 709 aaPredicted RBP8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 TGIF1Q15583 401 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 PTPN20Q4JDL3 420 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 CCDC70Q6NSX1 233 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 TRNP1Q6NT89 227 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 ALKBH5Q6P6C2 394 aaKnown RBP8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 PARS2Q7L3T8 475 aaKnown RBP8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 ZNF572Q7Z3I7 529 aaPredicted RBP8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 ZNF571Q7Z3V5 609 aaPredicted RBP8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 TFAP2DQ7Z6R9 452 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 B3GNT8Q7Z7M8 397 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 CLEC14AQ86T13 490 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 PARGQ86W56 976 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 SLC35F3Q8IY50 421 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 C1orf131Q8NDD1 294 aaKnown RBP8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 LMX1AQ8TE12 382 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 FAM81BQ96LP2 452 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 NPY6RQ99463 290 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 OCSTAMPQ9BR26 566 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 BOCQ9BWV1 1114 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 CLPBQ9H078 707 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 TKTL2Q9H0I9 626 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 ARHGEF38Q9NXL2 777 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 FAM53CQ9NYF3 392 aa8.67□□□□□ -1.02
TGFBR3-208ENST00000529608 APEX2Q9UBZ4 518 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms