RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 IZUMO3Q5VZ72 239 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 KDELC2Q7Z4H8 507 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 KBTBD6Q86V97 674 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 C1orf210Q8IVY1 113 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 NDUFAF2Q8N183 169 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 PGBD3Q8N328 593 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 HDDC3Q8N4P3 179 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 NAT8LQ8N9F0 302 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 RAB7BQ96AH8 199 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 OMDQ99983 421 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 TRIM31Q9BZY9 425 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 FBXL12Q9NXK8 326 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 USP36Q9P275 1121 aaKnown RBP21.12■□□□□ 0.97
LSM6-207ENST00000515311 SHOC2Q9UQ13 582 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 PPIL1Q9Y3C6 166 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 PLXND1Q9Y4D7 1925 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 CACNA1IQ9P0X4 2223 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 PRR33A8MZF0 331 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 ANKRD66B4E2M5 251 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 RIOK3O14730 519 aaKnown RBP21.11■□□□□ 0.97
LSM6-207ENST00000515311 LAMTOR5O43504 91 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 GPR37L1O60883 481 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 ADRB3P13945 408 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 TIMP2P16035 220 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 ITIH2P19823 946 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 NFKBIAP25963 317 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 AVPR2P30518 371 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 EPHB1P54762 984 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 GALNT3Q14435 633 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 SPARCL1Q14515 664 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 SYCP2LQ5T4T6 812 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 PIP5KL1Q5T9C9 394 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 AGBL4Q5VU57 503 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 ANKRD22Q5VYY1 191 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 FBXL19Q6PCT2 694 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 MCUQ8NE86 351 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 LPCAT1Q8NF37 534 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 MCCC1Q96RQ3 725 aaPredicted RBP21.11■□□□□ 0.97
LSM6-207ENST00000515311 ITM2CQ9NQX7 267 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 NCKAP1Q9Y2A7 1128 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 SNX24Q9Y343 169 aa21.11■□□□□ 0.97
LSM6-207ENST00000515311 CCDC163A0A0D9SF12 145 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 A0A0J9YYE9 177 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 A0A1W2PP55 124 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 TCRBV7S3A2A0A539 114 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 FAM86C2PA6NEL3 165 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 AP3B1O00203 1094 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 USP12O75317 370 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 RNASEH2AO75792 299 aaKnown RBP21.1■□□□□ 0.97
LSM6-207ENST00000515311 TMEM63AO94886 807 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 TRBC1P01850 177 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 CHRNA4P43681 627 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 TPMTP51580 245 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 SARNPP82979 210 aaKnown RBP21.1■□□□□ 0.97
LSM6-207ENST00000515311 CALCOCO2Q13137 446 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 QPCTQ16769 361 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 DENND5AQ6IQ26 1287 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 HIBCHQ6NVY1 386 aaPredicted RBP21.1■□□□□ 0.97
LSM6-207ENST00000515311 PPP1R21Q6ZMI0 780 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 USP45Q70EL2 814 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 TTC7BQ86TV6 843 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 RMDN1Q96DB5 314 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 SCRN2Q96FV2 425 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 DPH5Q9H2P9 285 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 CASS4Q9NQ75 786 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 GRHL1Q9NZI5 618 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 SERGEFQ9UGK8 458 aa21.1■□□□□ 0.97
LSM6-207ENST00000515311 DMGDHQ9UI17 866 aaKnown RBP21.1■□□□□ 0.97
LSM6-207ENST00000515311 CAPN8A6NHC0 703 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 TP73O15350 636 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 AP1G1O43747 822 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 ZNF217O75362 1048 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 TDGF1P13385 188 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 XPAP23025 273 aaPredicted RBP21.09■□□□□ 0.97
LSM6-207ENST00000515311 TERF1P54274 439 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 GUCY2DQ02846 1103 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 OLIG2Q13516 323 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 TEX35Q5T0J7 233 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 ERAP2Q6P179 960 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 SLC25A41Q8N5S1 370 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 GANCQ8TET4 914 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 LYSMD1Q96S90 227 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 SRPK1Q96SB4 655 aaKnown RBP21.09■□□□□ 0.97
LSM6-207ENST00000515311 APOL2Q9BQE5 337 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 FRMD8Q9BZ67 464 aaPredicted RBP21.09■□□□□ 0.97
LSM6-207ENST00000515311 XAB2Q9HCS7 855 aaKnown RBP21.09■□□□□ 0.97
LSM6-207ENST00000515311 PCDH12Q9NPG4 1184 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 ANAPC5Q9UJX4 755 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 FBXO4Q9UKT5 387 aa21.09■□□□□ 0.97
LSM6-207ENST00000515311 PLK4O00444 970 aa21.08■□□□□ 0.97
LSM6-207ENST00000515311 AREL1O15033 823 aa21.08■□□□□ 0.97
LSM6-207ENST00000515311 MLNP12872 115 aa21.08■□□□□ 0.97
LSM6-207ENST00000515311 OXTRP30559 389 aa21.08■□□□□ 0.97
LSM6-207ENST00000515311 ABL2P42684 1182 aa21.08■□□□□ 0.97
LSM6-207ENST00000515311 ITGA8P53708 1063 aa21.08■□□□□ 0.97
LSM6-207ENST00000515311 CAV1Q03135 178 aa21.08■□□□□ 0.97
LSM6-207ENST00000515311 ELP6Q0PNE2 266 aa21.08■□□□□ 0.97
LSM6-207ENST00000515311 CDH17Q12864 832 aa21.08■□□□□ 0.97
LSM6-207ENST00000515311 LRRC8BQ6P9F7 803 aa21.08■□□□□ 0.97
LSM6-207ENST00000515311 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms