RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 SEMA4BQ9NPR2 832 aaPredicted RBP16.2■□□□□ 0.18
TRIO-221ENST00000513206 DCXO43602 365 aa16.2■□□□□ 0.18
TRIO-221ENST00000513206 ASGR1P07306 291 aa16.2■□□□□ 0.18
TRIO-221ENST00000513206 TUBA1BP68363 451 aa16.2■□□□□ 0.18
TRIO-221ENST00000513206 GTF2BQ00403 316 aa16.2■□□□□ 0.18
TRIO-221ENST00000513206 BHLHB9Q6PI77 547 aa16.2■□□□□ 0.18
TRIO-221ENST00000513206 TUBA1AQ71U36 451 aa16.2■□□□□ 0.18
TRIO-221ENST00000513206 REM2Q8IYK8 340 aaPredicted RBP16.2■□□□□ 0.18
TRIO-221ENST00000513206 MLYCDO95822 493 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 SMAD3P84022 425 aaKnown RBP16.19■□□□□ 0.18
TRIO-221ENST00000513206 PDZK1Q5T2W1 519 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 SLAIN1Q8ND83 568 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 OR10H1Q9Y4A9 318 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 DDX3XO00571 662 aaKnown RBP eCLIP16.19■□□□□ 0.18
TRIO-221ENST00000513206 APODP05090 189 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 MAXP61244 160 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 PPP1R26Q5T8A7 1209 aaPredicted RBP16.19■□□□□ 0.18
TRIO-221ENST00000513206 CDC73Q6P1J9 531 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 IZUMO1Q8IYV9 350 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 SCAIQ8N9R8 606 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 KIAA1522Q9P206 1035 aaPredicted RBP16.19■□□□□ 0.18
TRIO-221ENST00000513206 TELO2Q9Y4R8 837 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 ISM1B1AKI9 464 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 TEX28O15482 410 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 SMARCB1Q12824 385 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 SLC5A9Q2M3M2 681 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 GALNT15Q8N3T1 639 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 ITFG1Q8TB96 612 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 DGCR14Q96DF8 476 aaKnown RBP16.19■□□□□ 0.18
TRIO-221ENST00000513206 C19orf60Q96EN9 201 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 FAIM2Q9BWQ8 316 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 SNPHO15079 494 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 ARF4P18085 180 aaPredicted RBP16.19■□□□□ 0.18
TRIO-221ENST00000513206 KCNJ2P63252 427 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 ACTRT2Q8TDY3 377 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 CDT1Q9H211 546 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 SUCOQ9UBS9 1254 aaKnown RBP16.19■□□□□ 0.18
TRIO-221ENST00000513206 PTPRJQ12913 1337 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.19■□□□□ 0.18
TRIO-221ENST00000513206 PHGDHO43175 533 aaKnown RBP16.19■□□□□ 0.18
TRIO-221ENST00000513206 LPOP22079 712 aaPredicted RBP16.19■□□□□ 0.18
TRIO-221ENST00000513206 ZCCHC23Q6ZST2 131 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 PHYKPLQ8IUZ5 450 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 REXO5Q96IC2 774 aaKnown RBP16.19■□□□□ 0.18
TRIO-221ENST00000513206 DUSP16Q9BY84 665 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 KLHL31Q9H511 634 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 SPATA2Q9UM82 520 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 TRIM32Q13049 653 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 TMC3Q7Z5M5 1100 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 ZDHHC13Q8IUH4 622 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 ZC3H7AQ8IWR0 971 aaKnown RBP16.19■□□□□ 0.18
TRIO-221ENST00000513206 TMEM161BQ8NDZ6 487 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 CCDC28BQ9BUN5 200 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 CERS4Q9HA82 394 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 FBXO6Q9NRD1 293 aaPredicted RBP16.19■□□□□ 0.18
TRIO-221ENST00000513206 AK5Q9Y6K8 562 aa16.19■□□□□ 0.18
TRIO-221ENST00000513206 FARP2O94887 1054 aaPredicted RBP16.18■□□□□ 0.18
TRIO-221ENST00000513206 PIRTP0C851 137 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 FAM151BQ6UXP7 276 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 C12orf50Q8NA57 414 aaPredicted RBP16.18■□□□□ 0.18
TRIO-221ENST00000513206 TSPAN18Q96SJ8 248 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 DNAJC18Q9H819 358 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 ADAM28Q9UKQ2 775 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 CD3EAPO15446 510 aaKnown RBP16.18■□□□□ 0.18
TRIO-221ENST00000513206 SEMA3DO95025 777 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 PSMG1O95456 288 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 HNF4AP41235 474 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 RPL5P46777 297 aaKnown RBP16.18■□□□□ 0.18
TRIO-221ENST00000513206 IRF8Q02556 426 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 PIGZQ86VD9 579 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 ETNPPLQ8TBG4 499 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 MTMR9Q96QG7 549 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 HK2P52789 917 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 MTAPQ13126 283 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 BLMHQ13867 455 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 COX4I2Q96KJ9 171 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 MAPRE3Q9UPY8 281 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 NTRK1P04629 796 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 DENND6AQ8IWF6 608 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 UXS1Q8NBZ7 420 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 BSNDQ8WZ55 320 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 HAS1Q92839 578 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 DUSP9Q99956 384 aaKnown RBP16.18■□□□□ 0.18
TRIO-221ENST00000513206 RSL24D1Q9UHA3 163 aaKnown RBP16.18■□□□□ 0.18
TRIO-221ENST00000513206 MED1Q15648 1581 aaPredicted RBP16.18■□□□□ 0.18
TRIO-221ENST00000513206 BUD23O43709 281 aaKnown RBP16.18■□□□□ 0.18
TRIO-221ENST00000513206 ZNF844Q08AG5 666 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 SF1Q15637 639 aaKnown RBP16.18■□□□□ 0.18
TRIO-221ENST00000513206 MYLK2Q9H1R3 596 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 CAPSQ13938 189 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 EFCAB3Q8N7B9 438 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 CERS2Q96G23 380 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 AGXT2Q9BYV1 514 aa16.18■□□□□ 0.18
TRIO-221ENST00000513206 A0A087X0B3 334 aa16.17■□□□□ 0.18
TRIO-221ENST00000513206 ETS1P14921 441 aa16.17■□□□□ 0.18
TRIO-221ENST00000513206 HYIQ5T013 277 aa16.17■□□□□ 0.18
TRIO-221ENST00000513206 DHFR2Q86XF0 187 aa16.17■□□□□ 0.18
TRIO-221ENST00000513206 TMEM216Q9P0N5 145 aa16.17■□□□□ 0.18
TRIO-221ENST00000513206 PCDHGA3Q9Y5H0 932 aa16.17■□□□□ 0.18
TRIO-221ENST00000513206 PDE9AO76083 593 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms