RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 RPL26L1Q9UNX3 145 aaKnown RBP14.66□□□□□ -0.06
BRCA1-223ENST00000494123 PCDHGA2Q9Y5H1 932 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 PLXND1Q9Y4D7 1925 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 TBC1D3DA0A087WVF3 549 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 TBC1D3IA0A087WXS9 549 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 TBC1D3EA0A087X179 549 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 TBC1D3KA0A087X1G2 549 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 CTAGE15A4D2H0 777 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 TBC1D3FA6NER0 549 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-223ENST00000494123 PRR23AA6NEV1 266 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 ERI2A8K979 691 aaKnown RBP14.65□□□□□ -0.06
BRCA1-223ENST00000494123 TBC1D3LB9A6J9 549 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 PLRG1O43660 514 aaKnown RBP14.65□□□□□ -0.06
BRCA1-223ENST00000494123 PCDH8O95206 1070 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 SEMA4FO95754 770 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 NDST3O95803 873 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 PRKCGP05129 697 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 TBC1D3HP0C7X1 549 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 CTAGE8P0CG41 777 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 ACSL1P33121 698 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 CNR2P34972 360 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 GRIA4P48058 902 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 TERF1P54274 439 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 ADPRHP54922 357 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 FAM193AP78312 1265 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 SYCP2LQ5T4T6 812 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 TBC1D3GQ6DHY5 549 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 TBC1D3CQ6IPX1 549 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 USP45Q70EL2 814 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 CEP68Q76N32 757 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 MAATS1Q7Z4T9 603 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 CTAGE6Q86UF2 777 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 C11orf74Q86VG3 221 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 CTAGE4Q8IX94 777 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 TBC1D3Q8IZP1 549 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-223ENST00000494123 PDCD7Q8N8D1 485 aaKnown RBP14.65□□□□□ -0.06
BRCA1-223ENST00000494123 PIH1D2Q8WWB5 315 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 GAB3Q8WWW8 586 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 SPOCK2Q92563 424 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 NELL1Q92832 810 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 FAM131CQ96AQ9 280 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 MRGPRX2Q96LB1 330 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 FICDQ9BVA6 458 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 GPR174Q9BXC1 333 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 LRRC40Q9H9A6 602 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 PCDH12Q9NPG4 1184 aa14.65□□□□□ -0.06
BRCA1-223ENST00000494123 WSB2Q9NYS7 404 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-223ENST00000494123 H0Y858 1186 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 TTI1O43156 1089 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 PRLP01236 227 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 EPOP01588 193 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 APRTP07741 180 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 CYP2A6P11509 494 aaPredicted RBP14.64□□□□□ -0.07
BRCA1-223ENST00000494123 CTPS1P17812 591 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 ADCY8P40145 1251 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 PTGIRP43119 386 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 RPL6Q02878 288 aaKnown RBP14.64□□□□□ -0.07
BRCA1-223ENST00000494123 SEMA5AQ13591 1074 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 PTK6Q13882 451 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 NAPEPLDQ6IQ20 393 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 ZC3H14Q6PJT7 736 aaKnown RBP14.64□□□□□ -0.07
BRCA1-223ENST00000494123 JAMLQ86YT9 394 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 SLC25A41Q8N5S1 370 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 ZBTB44Q8NCP5 570 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 OR2T34Q8NGX1 318 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 TRIB3Q96RU7 358 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 TBL1YQ9BQ87 522 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 KDM4CQ9H3R0 1056 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 ITM2BQ9Y287 266 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 NEU2Q9Y3R4 380 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 FADS3Q9Y5Q0 445 aa14.64□□□□□ -0.07
BRCA1-223ENST00000494123 A0A0J9YYE9 177 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 LOC285095A0A1B0GVY8 99 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 ANKRD66B4E2M5 251 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 RIOK3O14730 519 aaKnown RBP14.63□□□□□ -0.07
BRCA1-223ENST00000494123 TSPAN6O43657 245 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 AP1G1O43747 822 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 AP2A1O95782 977 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 AGTP01019 485 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 TRBC1P01850 177 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 HLA-DPA1P20036 260 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 TAS2R38P59533 333 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 SRSF5Q13243 272 aaKnown RBP14.63□□□□□ -0.07
BRCA1-223ENST00000494123 SPARCL1Q14515 664 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 LINC00523Q86TU6 105 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 CXorf40AQ8TE69 158 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 SCRN2Q96FV2 425 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 APOL2Q9BQE5 337 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 PREBQ9HCU5 417 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 MBD1Q9UIS9 605 aaPredicted RBP14.63□□□□□ -0.07
BRCA1-223ENST00000494123 NUMA1Q14980 2115 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.63□□□□□ -0.07
BRCA1-223ENST00000494123 CAPN8A6NHC0 703 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 A8MX80 341 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 AREL1O15033 823 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 USP12O75317 370 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 FGF1P05230 155 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 ALPIP09923 528 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 ITIH2P19823 946 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 BCKDHBP21953 392 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms