RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 RBFAQ8N0V3 343 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 WDTC1Q8N5D0 677 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 LMX1AQ8TE12 382 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 ZNF606Q8WXB4 792 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 RNF34Q969K3 372 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 LIN37Q96GY3 246 aaPredicted RBP13.33□□□□□ -0.28
HDAC3-213ENST00000492506 CCDC114Q96M63 670 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 LENG8Q96PV6 779 aaPredicted RBP13.33□□□□□ -0.28
HDAC3-213ENST00000492506 C2orf49Q9BVC5 232 aaPredicted RBP13.33□□□□□ -0.28
HDAC3-213ENST00000492506 SELENOOQ9BVL4 669 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 C1QTNF2Q9BXJ5 285 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 MUC3BQ9H195 1237 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 HSD3B7Q9H2F3 369 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 TNKS2Q9H2K2 1166 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 TCEAL2Q9H3H9 227 aaPredicted RBP13.33□□□□□ -0.28
HDAC3-213ENST00000492506 HAUS4Q9H6D7 363 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 PCDHGA7Q9Y5G6 932 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 UTP20O75691 2785 aaKnown RBP13.32□□□□□ -0.28
HDAC3-213ENST00000492506 GOLGA6L10A0A0M3HER8 536 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 ANKRD65E5RJM6 399 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 P4HA2O15460 535 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 SUV39H1O43463 412 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 AP1G1O43747 822 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 DNAJC8O75937 253 aaPredicted RBP13.32□□□□□ -0.28
HDAC3-213ENST00000492506 FESP07332 822 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 GLI1P08151 1106 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 GSTA1P08263 222 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 ITGB7P26010 798 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 RPS6KA3P51812 740 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 NEK3P51956 506 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 KRT83P78385 493 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 TGIF1Q15583 401 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 CYB5D1Q6P9G0 228 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 XKR5Q6UX68 686 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 B3GNT8Q7Z7M8 397 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 SLC35F6Q8N357 371 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 DCAF4L2Q8NA75 395 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 AENQ8WTP8 325 aaKnown RBP13.32□□□□□ -0.28
HDAC3-213ENST00000492506 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.32□□□□□ -0.28
HDAC3-213ENST00000492506 CAVIN3Q969G5 261 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 VOPP1Q96AW1 172 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 FEM1CQ96JP0 617 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 IL12RB2Q99665 862 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 CCDC3Q9BQI4 270 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 ASNSD1Q9NWL6 643 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 ACSL6Q9UKU0 697 aa13.32□□□□□ -0.28
HDAC3-213ENST00000492506 CORO1CQ9ULV4 474 aaPredicted RBP13.32□□□□□ -0.28
HDAC3-213ENST00000492506 HEMK1Q9Y5R4 338 aaPredicted RBP13.32□□□□□ -0.28
HDAC3-213ENST00000492506 SPENQ96T58 3664 aaKnown RBP13.31□□□□□ -0.28
HDAC3-213ENST00000492506 A0A1B0GTH6 734 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 LMO7DNF2Z398 122 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 MYO1FO00160 1098 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 FPGTO14772 594 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 GRAP2O75791 330 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 ZMPSTE24O75844 475 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 FAM107AO95990 144 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 ITGB2P05107 769 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 RHOCP08134 193 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 MYBL2P10244 700 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 SLC5A2P31639 672 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 L1CAMP32004 1257 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 ADKP55263 362 aaKnown RBP13.31□□□□□ -0.28
HDAC3-213ENST00000492506 NME3Q13232 169 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 MTA1Q13330 715 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 XRCC4Q13426 336 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 C1orf61Q13536 156 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 C6orf132Q5T0Z8 1188 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 PARS2Q7L3T8 475 aaKnown RBP13.31□□□□□ -0.28
HDAC3-213ENST00000492506 ZNF572Q7Z3I7 529 aaPredicted RBP13.31□□□□□ -0.28
HDAC3-213ENST00000492506 DRAXINQ8NBI3 349 aaPredicted RBP13.31□□□□□ -0.28
HDAC3-213ENST00000492506 OR8K1Q8NGG5 319 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 WDR48Q8TAF3 677 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 SPATA20Q8TB22 786 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 EXTL1Q92935 676 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 NAT6Q93015 286 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 SGF29Q96ES7 293 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 PPP1R16AQ96I34 528 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 CPXM1Q96SM3 734 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 LRRC61Q9BV99 259 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 CLPBQ9H078 707 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 SIK2Q9H0K1 926 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 SLC24A3Q9HC58 644 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 RMND1Q9NWS8 449 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 SPASTQ9UBP0 616 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 ZNF212Q9UDV6 495 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 IPO11Q9UI26 975 aaKnown RBP13.31□□□□□ -0.28
HDAC3-213ENST00000492506 RABGEF1Q9UJ41 708 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 SNX10Q9Y5X0 201 aa13.31□□□□□ -0.28
HDAC3-213ENST00000492506 CFAP73A6NFT4 308 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 IGLON5A6NGN9 336 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 DRGXA6NNA5 263 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 HMGB1P1B2RPK0 211 aaPredicted RBP13.3□□□□□ -0.28
HDAC3-213ENST00000492506 PDLIM1O00151 329 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 PLD2O14939 933 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 YY2O15391 372 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 MED7O43513 233 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 ENDOD1O94919 500 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 KRT5P13647 590 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 UGT1A5P35504 534 aa13.3□□□□□ -0.28
HDAC3-213ENST00000492506 ABL2P42684 1182 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms