RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 A0A0U1RQF3 1178 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 HSPB2A8KAH6 182 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 SOCS6O14544 535 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 HLA-DOBP13765 273 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 TNNT1P13805 278 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 MCM3P25205 808 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 HTR3AP46098 478 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 SLC20A2Q08357 652 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 FCN2Q15485 313 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 HSPB2Q16082 182 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 ATP13A5Q4VNC0 1218 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 SYCP2LQ5T4T6 812 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 CES5AQ6NT32 575 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 IL20RBQ6UXL0 311 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 SLC26A9Q7LBE3 791 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 PARP16Q8N5Y8 322 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 OR13A1Q8NGR1 328 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 POF1BQ8WVV4 589 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 THAP4Q8WY91 577 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 SNAPC3Q92966 411 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 FBXO17Q96EF6 278 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 TRMT61BQ9BVS5 477 aaKnown RBP4.32□□□□□ -1.72
SCAF11-207ENST00000484275 CSTL1Q9H114 145 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 ZNF696Q9H7X3 374 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 ZNF334Q9HCZ1 680 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-207ENST00000484275 MMP24Q9Y5R2 645 aa4.32□□□□□ -1.72
SCAF11-207ENST00000484275 TYW5A2RUC4 315 aaKnown RBP4.31□□□□□ -1.72
SCAF11-207ENST00000484275 ERI2A8K979 691 aaKnown RBP4.31□□□□□ -1.72
SCAF11-207ENST00000484275 KLRF2D3W0D1 207 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 C16orf97H3BN30 126 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 RFPL2O75678 378 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 ATP1A1P05023 1023 aaKnown RBP4.31□□□□□ -1.72
SCAF11-207ENST00000484275 CHRM4P08173 479 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 CETPP11597 493 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 SRCP12931 536 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 HNRNPH1P31943 449 aaKnown RBP4.31□□□□□ -1.72
SCAF11-207ENST00000484275 ADD2P35612 726 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 GOLGA8FQ08AF8 430 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 ARHGEF6Q15052 776 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 CCDC6Q16204 474 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 SYT16Q17RD7 645 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 TUBB8Q3ZCM7 444 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 ACCSLQ4AC99 568 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 DENND1BQ6P3S1 775 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 B3GNT6Q6ZMB0 384 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 MOB3CQ70IA8 216 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 KRTAP7-1Q8IUC3 87 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 ODF3L1Q8IXM7 274 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 WDSUB1Q8N9V3 476 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 GJC3Q8NFK1 279 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 RILPL2Q969X0 211 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 SDCCAG3Q96C92 435 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 ZNF501Q96CX3 271 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-207ENST00000484275 DUX3Q96PT4 197 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 EGLN1Q9GZT9 426 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 SLC32A1Q9H598 525 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 SAYSD1Q9NPB0 183 aa4.31□□□□□ -1.72
SCAF11-207ENST00000484275 ANTXRLA6NF34 631 aa4.3□□□□□ -1.72
SCAF11-207ENST00000484275 PLRG1O43660 514 aaKnown RBP4.3□□□□□ -1.72
SCAF11-207ENST00000484275 KLK8O60259 260 aa4.3□□□□□ -1.72
SCAF11-207ENST00000484275 TK1P04183 234 aa4.3□□□□□ -1.72
SCAF11-207ENST00000484275 CDKN1AP38936 164 aa4.3□□□□□ -1.72
SCAF11-207ENST00000484275 RELQ04864 619 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-207ENST00000484275 WDR73Q6P4I2 378 aa4.3□□□□□ -1.72
SCAF11-207ENST00000484275 RUBCNQ92622 972 aa4.3□□□□□ -1.72
SCAF11-207ENST00000484275 RND1Q92730 232 aa4.3□□□□□ -1.72
SCAF11-207ENST00000484275 TWNKQ96RR1 684 aa4.3□□□□□ -1.72
SCAF11-207ENST00000484275 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.3□□□□□ -1.72
SCAF11-207ENST00000484275 KLHL1Q9NR64 748 aa4.3□□□□□ -1.72
SCAF11-207ENST00000484275 DNAJC16Q9Y2G8 782 aa4.3□□□□□ -1.72
SCAF11-207ENST00000484275 DERAQ9Y315 318 aa4.3□□□□□ -1.72
SCAF11-207ENST00000484275 NFE2L3Q9Y4A8 694 aa4.3□□□□□ -1.72
SCAF11-207ENST00000484275 A3GALT2U3KPV4 340 aa4.3□□□□□ -1.72
SCAF11-207ENST00000484275 FAM90A7PA6NKC0 464 aa4.29□□□□□ -1.72
SCAF11-207ENST00000484275 FAM90A22PA8MWA6 464 aa4.29□□□□□ -1.72
SCAF11-207ENST00000484275 FAM90A12PA8MX19 464 aa4.29□□□□□ -1.72
SCAF11-207ENST00000484275 FAM90A23PA8MXZ1 464 aa4.29□□□□□ -1.72
SCAF11-207ENST00000484275 B9A039 149 aa4.29□□□□□ -1.72
SCAF11-207ENST00000484275 EDIL3O43854 480 aa4.29□□□□□ -1.72
SCAF11-207ENST00000484275 AARSP49588 968 aaKnown RBP eCLIP4.29□□□□□ -1.72
SCAF11-207ENST00000484275 PLEKHA7Q6IQ23 1121 aa4.29□□□□□ -1.72
SCAF11-207ENST00000484275 C1orf228Q6PIY5 440 aa4.29□□□□□ -1.72
SCAF11-207ENST00000484275 C17orf99Q6UX52 265 aa4.29□□□□□ -1.72
SCAF11-207ENST00000484275 FOXRED2Q8IWF2 684 aa4.29□□□□□ -1.72
SCAF11-207ENST00000484275 RAB40AQ8WXH6 277 aa4.29□□□□□ -1.72
SCAF11-207ENST00000484275 PLCB1Q9NQ66 1216 aa4.29□□□□□ -1.72
SCAF11-207ENST00000484275 TINAGQ9UJW2 476 aa4.29□□□□□ -1.72
SCAF11-207ENST00000484275 TCF19Q9Y242 345 aa4.29□□□□□ -1.72
SCAF11-207ENST00000484275 PCDHGB5Q9Y5G0 923 aa4.29□□□□□ -1.72
SCAF11-207ENST00000484275 PDS5AQ29RF7 1337 aaKnown RBP4.28□□□□□ -1.72
SCAF11-207ENST00000484275 A0A1B0GU03 582 aa4.28□□□□□ -1.72
SCAF11-207ENST00000484275 C17orf113A0A1B0GUU1 675 aa4.28□□□□□ -1.72
SCAF11-207ENST00000484275 A0A1B0GVY2 172 aa4.28□□□□□ -1.72
SCAF11-207ENST00000484275 PABPN1LA6NDY0 278 aaKnown RBP4.28□□□□□ -1.72
SCAF11-207ENST00000484275 F5H423 210 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-207ENST00000484275 CEP104O60308 925 aa4.28□□□□□ -1.72
SCAF11-207ENST00000484275 TIPRLO75663 272 aa4.28□□□□□ -1.72
SCAF11-207ENST00000484275 NDUFB4O95168 129 aa4.28□□□□□ -1.72
SCAF11-207ENST00000484275 TBX6O95947 436 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-207ENST00000484275 CDH1P12830 882 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms