RNA–Protein interactions for RNA: ENST00000481168.1

RPN1-204, Transcript of ribophorin I, humanhuman

TSL 2

Gene RPN1, Length 751 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-204ENST00000481168 TAC4Q86UU9 113 aa12.86□□□□□ -0.35
RPN1-204ENST00000481168 ATP6V0D2Q8N8Y2 350 aa12.86□□□□□ -0.35
RPN1-204ENST00000481168 RPRD1AQ96P16 312 aaPredicted RBP12.86□□□□□ -0.35
RPN1-204ENST00000481168 MIS12Q9H081 205 aa12.86□□□□□ -0.35
RPN1-204ENST00000481168 SIX2Q9NPC8 291 aa12.86□□□□□ -0.35
RPN1-204ENST00000481168 MBNL1Q9NR56 388 aaKnown RBP12.86□□□□□ -0.35
RPN1-204ENST00000481168 OCIAD1Q9NX40 245 aa12.86□□□□□ -0.35
RPN1-204ENST00000481168 SLC12A6Q9UHW9 1150 aa12.86□□□□□ -0.35
RPN1-204ENST00000481168 KCND3Q9UK17 655 aa12.86□□□□□ -0.35
RPN1-204ENST00000481168 CNTN6Q9UQ52 1028 aa12.86□□□□□ -0.35
RPN1-204ENST00000481168 ENTPD4Q9Y227 616 aa12.86□□□□□ -0.35
RPN1-204ENST00000481168 DIDO1Q9BTC0 2240 aaKnown RBP12.85□□□□□ -0.35
RPN1-204ENST00000481168 B4DGG1 531 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 TOR1BO14657 336 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 FYNP06241 537 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 SLC9A1P19634 815 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 MPSTP25325 297 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 LEPRP48357 1165 aaKnown RBP12.85□□□□□ -0.35
RPN1-204ENST00000481168 RAB15P59190 212 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 SRP54P61011 504 aaKnown RBP12.85□□□□□ -0.35
RPN1-204ENST00000481168 TRA2AQ13595 282 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPN1-204ENST00000481168 ERV3-1Q14264 604 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 HLTFQ14527 1009 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPN1-204ENST00000481168 MIIPQ5JXC2 388 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 C22orf39Q6P5X5 142 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 GJB7Q6PEY0 223 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 LINGO4Q6UY18 593 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 NYAP1Q6ZVC0 841 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 NT5C1BQ96P26 610 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 PRMT1Q99873 361 aaKnown RBP12.85□□□□□ -0.35
RPN1-204ENST00000481168 C2orf49Q9BVC5 232 aaPredicted RBP12.85□□□□□ -0.35
RPN1-204ENST00000481168 C1QTNF7Q9BXJ2 289 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 DPEP2Q9H4A9 486 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPN1-204ENST00000481168 KLQ9UEF7 1012 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 VPS51Q9UID3 782 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 POLHQ9Y253 713 aa12.85□□□□□ -0.35
RPN1-204ENST00000481168 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPN1-204ENST00000481168 OAS3Q9Y6K5 1087 aaKnown RBP12.85□□□□□ -0.35
RPN1-204ENST00000481168 NIPBLQ6KC79 2804 aaeCLIP12.85□□□□□ -0.35
RPN1-204ENST00000481168 BECN2A8MW95 431 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 KCNU1A8MYU2 1149 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 SORBS2O94875 1100 aaKnown RBP12.84□□□□□ -0.35
RPN1-204ENST00000481168 TNFP01375 233 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 HTR1BP28222 390 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 ABL2P42684 1182 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 NOP2P46087 812 aaKnown RBP12.84□□□□□ -0.35
RPN1-204ENST00000481168 IRAK1P51617 712 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 CLCN6P51797 869 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 LIMK2P53671 638 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 GCNT1Q02742 428 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 FBXL22Q6P050 247 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 PMF1Q6P1K2 205 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 RAB7BQ96AH8 199 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 FAM149B1Q96BN6 582 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 RTP4Q96DX8 246 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 TEFMQ96QE5 360 aaKnown RBP12.84□□□□□ -0.35
RPN1-204ENST00000481168 CTRCQ99895 268 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 HEPHQ9BQS7 1158 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 CRACR2AQ9BSW2 395 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 SLC4A5Q9BY07 1137 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 RUBCNLQ9H714 662 aa12.84□□□□□ -0.35
RPN1-204ENST00000481168 C16orf96A6NNT2 1141 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 TMEM110-MUSTN1A8MSY1 372 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 RHPN2P1A8MT19 583 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 B4E171 279 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 ZW10O43264 779 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 MMP20O60882 483 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 DNAJB5O75953 348 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 FBXO21O94952 628 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 TBXAS1P24557 533 aaPredicted RBP12.83□□□□□ -0.36
RPN1-204ENST00000481168 BRD2P25440 801 aaKnown RBP12.83□□□□□ -0.36
RPN1-204ENST00000481168 ERCC5P28715 1186 aaPredicted RBP12.83□□□□□ -0.36
RPN1-204ENST00000481168 CD1CP29017 333 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 TSPAN7P41732 249 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 PEX5P50542 639 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 PGDP52209 483 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 PMS2P54278 862 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 CLPPQ16740 277 aaPredicted RBP12.83□□□□□ -0.36
RPN1-204ENST00000481168 SYPL2Q5VXT5 272 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 SPECC1LQ69YQ0 1117 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 SP5Q6BEB4 398 aaPredicted RBP12.83□□□□□ -0.36
RPN1-204ENST00000481168 TRIM65Q6PJ69 517 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 TMEM270Q6UE05 265 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 LCLAT1Q6UWP7 414 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 PPM1KQ8N3J5 372 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 RBM15Q96T37 977 aaKnown RBP eCLIP12.83□□□□□ -0.363e-6■■□□□ 11.6
RPN1-204ENST00000481168 PSMB7Q99436 277 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 SPRY4Q9C004 299 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 TRIT1Q9H3H1 467 aaKnown RBP12.83□□□□□ -0.36
RPN1-204ENST00000481168 THAP9Q9H5L6 903 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 ACP6Q9NPH0 428 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 SAMSN1Q9NSI8 373 aaKnown RBP12.83□□□□□ -0.36
RPN1-204ENST00000481168 RRN3Q9NYV6 651 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 LUZP4Q9P127 313 aa12.83□□□□□ -0.36
RPN1-204ENST00000481168 GTPBP10A4D1E9 387 aaKnown RBP12.82□□□□□ -0.36
RPN1-204ENST00000481168 CDC14CA4D256 554 aa12.82□□□□□ -0.36
RPN1-204ENST00000481168 INPP4BO15327 924 aa12.82□□□□□ -0.36
RPN1-204ENST00000481168 CLDN11O75508 207 aa12.82□□□□□ -0.36
RPN1-204ENST00000481168 TM7SF2O76062 418 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms