RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 CLDN11O75508 207 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 FSBPO95073 299 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 KCNH1O95259 989 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 APODP05090 189 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 TYRP14679 529 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 MCM3P25205 808 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 GJA4P35212 333 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 GJC1P36383 396 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 KIR3DL1P43629 444 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 LMAN1P49257 510 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 VCPP55072 806 aaKnown RBP6.32□□□□□ -1.4
SF3B1-209ENST00000479532 CDH4P55283 916 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 TPI1P60174 286 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 ZXDAP98168 799 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 TNK2Q07912 1038 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 SIGLEC14Q08ET2 396 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 GRSF1Q12849 480 aaKnown RBP eCLIP6.32□□□□□ -1.4
SF3B1-209ENST00000479532 ZNF177Q13360 481 aaPredicted RBP6.32□□□□□ -1.4
SF3B1-209ENST00000479532 LRRC32Q14392 662 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 PDK2Q15119 407 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 C21orf62-AS1Q17RA5 79 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 CCDC38Q502W7 563 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 FAM133BQ5BKY9 247 aaKnown RBP6.32□□□□□ -1.4
SF3B1-209ENST00000479532 PIK3R6Q5UE93 754 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 NADSYN1Q6IA69 706 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 GRAMD4Q6IC98 578 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 RFWD3Q6PCD5 774 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 POMZP3Q6PJE2 187 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 RHBDF2Q6PJF5 856 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 OGFOD3Q6PK18 319 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 ZNF852Q6ZMS4 543 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 TPRG1Q6ZUI0 275 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 PEX26Q7Z412 305 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 POLNQ7Z5Q5 900 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 TMEM25Q86YD3 366 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 C1QL4Q86Z23 238 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 MFN1Q8IWA4 741 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 C17orf53Q8N3J3 647 aaPredicted RBP6.32□□□□□ -1.4
SF3B1-209ENST00000479532 CARNMT1Q8N4J0 409 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 ARHGEF39Q8N4T4 335 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 CCDC185Q8N715 623 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 UBL4BQ8N7F7 174 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 KCTD6Q8NC69 237 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 TRIM58Q8NG06 486 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 TTC8Q8TAM2 541 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 UCMAQ8WVF2 138 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 BTN2A2Q8WVV5 523 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 FAM3CQ92520 227 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 HSPH1Q92598 858 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 EDAQ92838 391 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 CD101Q93033 1021 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 WBP2Q969T9 261 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 NELL2Q99435 816 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 SNRNP25Q9BV90 132 aaKnown RBP6.32□□□□□ -1.4
SF3B1-209ENST00000479532 MAK16Q9BXY0 300 aaKnown RBP6.32□□□□□ -1.4
SF3B1-209ENST00000479532 FUT8Q9BYC5 575 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 TRIM7Q9C029 511 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 ZYG11BQ9C0D3 744 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 LINC00597Q9H2U6 94 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 LZTFL1Q9NQ48 299 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 HPS4Q9NQG7 708 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 HEBP1Q9NRV9 189 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.32□□□□□ -1.4
SF3B1-209ENST00000479532 DNAJC17Q9NVM6 304 aaKnown RBP6.32□□□□□ -1.4
SF3B1-209ENST00000479532 CPSF2Q9P2I0 782 aaKnown RBP6.32□□□□□ -1.4
SF3B1-209ENST00000479532 DEC1Q9P2X7 70 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 PPARGC1AQ9UBK2 798 aaKnown RBP6.32□□□□□ -1.4
SF3B1-209ENST00000479532 AMFRQ9UKV5 643 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 RAB21Q9UL25 225 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 REXO2Q9Y3B8 237 aaKnown RBP6.32□□□□□ -1.4
SF3B1-209ENST00000479532 MIA3Q5JRA6 1907 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 EYSQ5T1H1 3165 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 KIAA1549LQ6ZVL6 1849 aa6.32□□□□□ -1.4
SF3B1-209ENST00000479532 COL4A2P08572 1712 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 CCDC163A0A0D9SF12 145 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 MIF4GDA9UHW6 222 aaKnown RBP6.31□□□□□ -1.4
SF3B1-209ENST00000479532 ARNTLO00327 626 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 TRDMT1O14717 391 aaKnown RBP6.31□□□□□ -1.4
SF3B1-209ENST00000479532 PRODHO43272 600 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 SIGLEC6O43699 453 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 KIF5CO60282 957 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 CACNG3O60359 315 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 BUB1BO60566 1050 aaPredicted RBP6.31□□□□□ -1.4
SF3B1-209ENST00000479532 DNAJC6O75061 913 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 PALMO75781 387 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 LUC7L3O95232 432 aaKnown RBP6.31□□□□□ -1.4
SF3B1-209ENST00000479532 PENKP01210 267 aaPredicted RBP6.31□□□□□ -1.4
SF3B1-209ENST00000479532 KRT1P04264 644 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 RHOCP08134 193 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 DRD1P21728 446 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 COMTP21964 271 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 EPHB2P29323 1055 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 OR1E1P30953 314 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 SLC6A4P31645 630 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 HNRNPH1P31943 449 aaKnown RBP6.31□□□□□ -1.4
SF3B1-209ENST00000479532 SERPINB6P35237 376 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 MAPKAPK2P49137 400 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 CDH6P55285 790 aa6.31□□□□□ -1.4
SF3B1-209ENST00000479532 SLC25A11Q02978 314 aaKnown RBP6.31□□□□□ -1.4
SF3B1-209ENST00000479532 BNIP3Q12983 259 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms