RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 DDIT4Q9NX09 232 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 IPO11Q9UI26 975 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 DICER1Q9UPY3 1922 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 HEATR9A2RTY3 570 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 H0YJX3 145 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 GABRDO14764 452 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 SLC7A1P30825 629 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 CD151P48509 253 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 GJA9P57773 515 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 GPR141Q7Z602 305 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 ZC3H15Q8WU90 426 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 ZNF419Q96HQ0 510 aaPredicted RBP13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 PPP1R10Q96QC0 940 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 NAA50Q9GZZ1 169 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 CYP4F12Q9HCS2 524 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 INIPQ9NRY2 104 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 CD300AQ9UGN4 299 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 ZNHIT2Q9UHR6 403 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 SHROOM3Q8TF72 1996 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 TANC1Q9C0D5 1861 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 CASTOR2A6NHX0 329 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 AKAP10O43572 662 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 TPST1O60507 370 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 BMP10O95393 424 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 NFKB1P19838 968 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 CYP2B6P20813 491 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 ATP6V1B2P21281 511 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 KCNA5P22460 613 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 GRIA3P42263 894 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 PSMD8P48556 350 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 PGFP49763 221 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 CSE1LP55060 971 aaKnown RBP13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 DAOAP59103 153 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 TUBA4AP68366 448 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 PFKPQ01813 784 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 SEMA3BQ13214 749 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 KCTD21Q4G0X4 260 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 XKR5Q6UX68 686 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 BHLHA9Q7RTU4 235 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 LYSMD3Q7Z3D4 306 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 EPHX4Q8IUS5 362 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 CBR4Q8N4T8 237 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 ZBTB8BQ8NAP8 495 aaPredicted RBP13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 RDH11Q8TC12 318 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 UTP6Q9NYH9 597 aaKnown RBP13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 SLC8A2Q9UPR5 921 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 PLXNB2O15031 1838 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 MYADML2A6NDP7 307 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 JCHAINP01591 159 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 CTSHP09668 335 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 ZNF865P0CJ78 1059 aaPredicted RBP13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 PNPLA4P41247 253 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 TPI1P60174 286 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 FASTKQ14296 549 aaKnown RBP13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 SPATA22Q8NHS9 363 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 TSPYL2Q9H2G4 693 aaPredicted RBP13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 SPAG4Q9NPE6 437 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 SLC38A7Q9NVC3 462 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 RCOR3Q9P2K3 495 aaPredicted RBP13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 FBXW11Q9UKB1 542 aa13.4□□□□□ -0.26
PDZRN3-208ENST00000479530 ATP6AP2A0A1C7CYW4 349 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 A0A1W2PPW3 197 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 FAM155AB1AL88 458 aaPredicted RBP13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 SLCO1B7G3V0H7 640 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 ATP6AP2O75787 350 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 STAMBPO95630 424 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 APOA4P06727 396 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 COL6A2P12110 1019 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 YWHAQP27348 245 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 CD97P48960 835 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 SLC7A2P52569 658 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 PLK1P53350 603 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 NUP107P57740 925 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 SFSWAPQ12872 951 aaKnown RBP13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 SLC12A1Q13621 1099 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 FGD3Q5JSP0 725 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 CHST15Q7LFX5 561 aaPredicted RBP13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 FAM35AQ86V20 835 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 TOP6BLQ8N6T0 577 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 HM13Q8TCT9 377 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 HASPINQ8TF76 798 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 GFM2Q969S9 779 aaKnown RBP13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 RPL10LQ96L21 214 aaKnown RBP13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 UHRF1Q96T88 793 aaPredicted RBP13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 PAIP1Q9H074 479 aaKnown RBP13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 RHOJQ9H4E5 214 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 POMKQ9H5K3 350 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 FBRSL1Q9HCM7 1045 aaKnown RBP13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 STAP1Q9ULZ2 295 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 PMS2P3Q13401 168 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 SLC44A4Q53GD3 710 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 IL31Q6EBC2 164 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 OGFOD2Q6N063 350 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 PPP4R4Q6NUP7 873 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 KDELC2Q7Z4H8 507 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 CROCCP3Q8IVE0 287 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 KCTD13Q8WZ19 329 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 PPP1R14BQ96C90 147 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 TSNARE1Q96NA8 513 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 TMEM209Q96SK2 561 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms