RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 TNS1Q9HBL0 1735 aaKnown RBP4.83□□□□□ -1.64
LMBR1-216ENST00000477983 ABCB11O95342 1321 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 A0A1W2PPC4 97 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 C4orf47A7E2U8 309 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 PRSS44E7EML9 344 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 LAD1O00515 517 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 POLR2DO15514 142 aaKnown RBP4.83□□□□□ -1.64
LMBR1-216ENST00000477983 ZSCAN9O15535 394 aaPredicted RBP4.83□□□□□ -1.64
LMBR1-216ENST00000477983 KIF1CO43896 1103 aaKnown RBP4.83□□□□□ -1.64
LMBR1-216ENST00000477983 BBOX1O75936 387 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 UFL1O94874 794 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 SEC31AO94979 1220 aaKnown RBP4.83□□□□□ -1.64
LMBR1-216ENST00000477983 MBD4O95243 580 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 AKAP17AQ02040 695 aaKnown RBP4.83□□□□□ -1.64
LMBR1-216ENST00000477983 SEMA3BQ13214 749 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 CUL4BQ13620 913 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 ATP1A4Q13733 1029 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 PLCB4Q15147 1175 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 PRTGQ2VWP7 1150 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 CRY2Q49AN0 593 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 COBLL1Q53SF7 1204 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 ZNF569Q5MCW4 686 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 RAP1GAP2Q684P5 730 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 EMBQ6PCB8 327 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 KYAT3Q6YP21 454 aaKnown RBP4.83□□□□□ -1.64
LMBR1-216ENST00000477983 TOGARAM2Q6ZUX3 1019 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 RFX8Q6ZV50 586 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 TRAPPC11Q7Z392 1133 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 TADA2BQ86TJ2 420 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 FOXP4Q8IVH2 680 aaPredicted RBP4.83□□□□□ -1.64
LMBR1-216ENST00000477983 C10orf67Q8IYJ2 551 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 MIGA1Q8NAN2 632 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 TRIM58Q8NG06 486 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 NEK11Q8NG66 645 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 OR52L2PQ8NGH6 319 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 FAM76AQ8TAV0 307 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 CCDC47Q96A33 483 aaKnown RBP4.83□□□□□ -1.64
LMBR1-216ENST00000477983 ZNF845Q96IR2 970 aaPredicted RBP4.83□□□□□ -1.64
LMBR1-216ENST00000477983 MYCBPQ99417 103 aaPredicted RBP4.83□□□□□ -1.64
LMBR1-216ENST00000477983 NCAPGQ9BPX3 1015 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 COLEC11Q9BWP8 271 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 LRRC2Q9BYS8 371 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 EDEM3Q9BZQ6 932 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 FTOQ9C0B1 505 aaKnown RBP eCLIP4.83□□□□□ -1.64
LMBR1-216ENST00000477983 GJB4Q9NTQ9 266 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 FBXO2Q9UK22 296 aaPredicted RBP4.83□□□□□ -1.64
LMBR1-216ENST00000477983 ZMYND8Q9ULU4 1186 aaPredicted RBP4.83□□□□□ -1.64
LMBR1-216ENST00000477983 SLC4A4Q9Y6R1 1079 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 CHD4Q14839 1912 aa4.83□□□□□ -1.64
LMBR1-216ENST00000477983 COL1A1P02452 1464 aaPredicted RBP4.82□□□□□ -1.64
LMBR1-216ENST00000477983 SYNRGQ9UMZ2 1314 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 TMEM272A0A1B0GTI8 110 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 BICDL2A1A5D9 508 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 OR2W5A6NFC9 320 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 KIF28PB7ZC32 967 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 PRKAB2O43741 272 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 SLC28A2O43868 658 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 USO1O60763 962 aaKnown RBP4.82□□□□□ -1.64
LMBR1-216ENST00000477983 ERLIN2O94905 339 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 SGPL1O95470 568 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 FGFR1OPO95684 399 aaKnown RBP4.82□□□□□ -1.64
LMBR1-216ENST00000477983 SYF2O95926 243 aaKnown RBP4.82□□□□□ -1.64
LMBR1-216ENST00000477983 IDEP14735 1019 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 TCP1P17987 556 aaKnown RBP4.82□□□□□ -1.64
LMBR1-216ENST00000477983 GABRB3P28472 473 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 MARCKSP29966 332 aaPredicted RBP4.82□□□□□ -1.64
LMBR1-216ENST00000477983 LONP1P36776 959 aaKnown RBP4.82□□□□□ -1.64
LMBR1-216ENST00000477983 STT3AP46977 705 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 TM4SF4P48230 202 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 POLD2P49005 469 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 GSCP56915 257 aaPredicted RBP4.82□□□□□ -1.64
LMBR1-216ENST00000477983 TBX4P57082 545 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 ORC2Q13416 577 aaPredicted RBP4.82□□□□□ -1.64
LMBR1-216ENST00000477983 SLC15A2Q16348 729 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 MEA1Q16626 185 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 SLC5A9Q2M3M2 681 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.82□□□□□ -1.64
LMBR1-216ENST00000477983 ZNF658Q5TYW1 1059 aaPredicted RBP4.82□□□□□ -1.64
LMBR1-216ENST00000477983 GALNT17Q6IS24 598 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 CCDC144NLQ6NUI1 221 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 ACSM6Q6P461 480 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 CCNI2Q6ZMN8 369 aaPredicted RBP4.82□□□□□ -1.64
LMBR1-216ENST00000477983 MFSD6Q6ZSS7 791 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 C18orf65Q6ZTR6 163 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 CHST3Q7LGC8 479 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 APTXQ7Z2E3 356 aaKnown RBP4.82□□□□□ -1.64
LMBR1-216ENST00000477983 DEFB132Q7Z7B7 95 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 ADGRA1Q86SQ6 560 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 C2CD5Q86YS7 1000 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 MMGT1Q8N4V1 131 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 RNF10Q8N5U6 811 aaKnown RBP4.82□□□□□ -1.64
LMBR1-216ENST00000477983 ARFGAP2Q8N6H7 521 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 PJA1Q8NG27 643 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 MAGEC3Q8TD91 643 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 ZNF622Q969S3 477 aaKnown RBP eCLIP4.82□□□□□ -1.646e-11■■□□□ 11.9
LMBR1-216ENST00000477983 DHTKD1Q96HY7 919 aaPredicted RBP4.82□□□□□ -1.64
LMBR1-216ENST00000477983 SNX27Q96L92 541 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 TTLL2Q9BWV7 592 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 NAPBQ9H115 298 aa4.82□□□□□ -1.64
LMBR1-216ENST00000477983 PCDHAC1Q9H158 963 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms