RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 UBL4AP11441 157 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 CD72P21854 359 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 CHMP24386 653 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 DDX6P26196 483 aaKnown RBP eCLIP4.85□□□□□ -1.63
CDK13-203ENST00000465643 AVPR2P30518 371 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 DNASE1L3Q13609 305 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 SEC23BQ15437 767 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 ST3GAL2Q16842 350 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 FAM187BQ17R55 369 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 SLC9C1Q4G0N8 1177 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 EARS2Q5JPH6 523 aaKnown RBP4.85□□□□□ -1.63
CDK13-203ENST00000465643 PXKQ7Z7A4 578 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 NEK8Q86SG6 692 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 GPR149Q86SP6 731 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 TMPRSS6Q8IU80 811 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 BHLHE22Q8NFJ8 381 aaPredicted RBP4.85□□□□□ -1.63
CDK13-203ENST00000465643 METTL6Q8TCB7 284 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 VPS50Q96JG6 964 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 ADOQ96SZ5 270 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 SEPT11Q9NVA2 429 aaKnown RBP4.85□□□□□ -1.63
CDK13-203ENST00000465643 VPS28Q9UK41 221 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 COPG1Q9Y678 874 aaKnown RBP4.85□□□□□ -1.63
CDK13-203ENST00000465643 ZNF236Q9UL36 1845 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 ASTN1O14525 1302 aa4.85□□□□□ -1.63
CDK13-203ENST00000465643 KRTAP23-1A1A580 65 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 SYNDIG1LA6NDD5 238 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 SYN3O14994 580 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 TDP2O95551 362 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 SNAI1O95863 264 aaPredicted RBP4.84□□□□□ -1.63
CDK13-203ENST00000465643 CYP3A4P08684 503 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 U2AF2P26368 475 aaKnown RBP eCLIP4.84□□□□□ -1.63
CDK13-203ENST00000465643 ICAM3P32942 547 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 HOXD12P35452 270 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 DGKQP52824 942 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 NUCB2P80303 420 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 ACVR2BQ13705 512 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 THOC5Q13769 683 aaKnown RBP4.84□□□□□ -1.63
CDK13-203ENST00000465643 PKP1Q13835 747 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 PKN2Q16513 984 aaKnown RBP4.84□□□□□ -1.63
CDK13-203ENST00000465643 DENND1BQ6P3S1 775 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 FBXO46Q6PJ61 603 aaPredicted RBP4.84□□□□□ -1.63
CDK13-203ENST00000465643 ADGRG6Q86SQ4 1221 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 PLA2G4DQ86XP0 818 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 LSMEM1Q8N8F7 131 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 MXRA8Q9BRK3 442 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 HDHD5Q9BXW7 423 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 ZSCAN16Q9H4T2 348 aaPredicted RBP4.84□□□□□ -1.63
CDK13-203ENST00000465643 TMLHEQ9NVH6 421 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 THAP1Q9NVV9 213 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 DDX25Q9UHL0 483 aaKnown RBP4.84□□□□□ -1.63
CDK13-203ENST00000465643 RNF114Q9Y508 228 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 FRMPD4Q14CM0 1322 aa4.84□□□□□ -1.63
CDK13-203ENST00000465643 ZNFX1Q9P2E3 1918 aaKnown RBP4.84□□□□□ -1.63
CDK13-203ENST00000465643 CES2O00748 559 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 AP3D1O14617 1153 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 HNRNPRO43390 633 aaKnown RBP4.84□□□□□ -1.64
CDK13-203ENST00000465643 STAM2O75886 525 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 CFPP27918 469 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 CCND3P30281 292 aaPredicted RBP4.84□□□□□ -1.64
CDK13-203ENST00000465643 MCM7P33993 719 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 MLH1P40692 756 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 ARF3P61204 181 aaPredicted RBP4.84□□□□□ -1.64
CDK13-203ENST00000465643 ARF1P84077 181 aaKnown RBP4.84□□□□□ -1.64
CDK13-203ENST00000465643 PSG6Q00889 435 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 CEBPZQ03701 1054 aaKnown RBP4.84□□□□□ -1.64
CDK13-203ENST00000465643 CAMK1Q14012 370 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 RILPL1Q5EBL4 403 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 FAM173BQ6P4H8 233 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 LRRC56Q8IYG6 542 aaPredicted RBP4.84□□□□□ -1.64
CDK13-203ENST00000465643 RSPRY1Q96DX4 576 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 PERPQ96FX8 193 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 ZNF396Q96N95 335 aaPredicted RBP4.84□□□□□ -1.64
CDK13-203ENST00000465643 LENG8Q96PV6 779 aaPredicted RBP4.84□□□□□ -1.64
CDK13-203ENST00000465643 WDR11Q9BZH6 1224 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 INTS2Q9H0H0 1204 aaKnown RBP4.84□□□□□ -1.64
CDK13-203ENST00000465643 LMAN2LQ9H0V9 348 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 SERHL2Q9H4I8 314 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 PDGFCQ9NRA1 345 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 MGAT4CQ9UBM8 478 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 UBIAD1Q9Y5Z9 338 aa4.84□□□□□ -1.64
CDK13-203ENST00000465643 PLXNA1Q9UIW2 1896 aa4.83□□□□□ -1.64
CDK13-203ENST00000465643 DDX39AO00148 427 aaKnown RBP4.83□□□□□ -1.64
CDK13-203ENST00000465643 BAG4O95429 457 aaKnown RBP4.83□□□□□ -1.64
CDK13-203ENST00000465643 TMIGD3P0DMS9 266 aaPredicted RBP4.83□□□□□ -1.64
CDK13-203ENST00000465643 GCFC2P16383 781 aaKnown RBP4.83□□□□□ -1.64
CDK13-203ENST00000465643 ADRA1DP25100 572 aa4.83□□□□□ -1.64
CDK13-203ENST00000465643 GALNSP34059 522 aa4.83□□□□□ -1.64
CDK13-203ENST00000465643 HADHAP40939 763 aa4.83□□□□□ -1.64
CDK13-203ENST00000465643 DIO1P49895 249 aa4.83□□□□□ -1.64
CDK13-203ENST00000465643 NAP1L1P55209 391 aaKnown RBP4.83□□□□□ -1.64
CDK13-203ENST00000465643 SLC25A3Q00325 362 aa4.83□□□□□ -1.64
CDK13-203ENST00000465643 SP4Q02446 784 aa4.83□□□□□ -1.64
CDK13-203ENST00000465643 MPP3Q13368 585 aa4.83□□□□□ -1.64
CDK13-203ENST00000465643 GAB1Q13480 694 aa4.83□□□□□ -1.64
CDK13-203ENST00000465643 NAA25Q14CX7 972 aa4.83□□□□□ -1.64
CDK13-203ENST00000465643 CEP55Q53EZ4 464 aa4.83□□□□□ -1.64
CDK13-203ENST00000465643 UBXN11Q5T124 520 aa4.83□□□□□ -1.64
CDK13-203ENST00000465643 ZNF585AQ6P3V2 769 aa4.83□□□□□ -1.64
CDK13-203ENST00000465643 RINLQ6ZS11 566 aa4.83□□□□□ -1.64
CDK13-203ENST00000465643 MON1AQ86VX9 555 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms