RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 SPRYD7Q5W111 196 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PATL1Q86TB9 770 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 SERINC5Q86VE9 423 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 EXOC3L1Q86VI1 746 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 OR52E4Q8NGH9 312 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 UPF1Q92900 1129 aaKnown RBP eCLIP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PCDH18Q9HCL0 1135 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ZDHHC7Q9NXF8 308 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PTTG3PQ9NZH4 202 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 MARCH2Q9P0N8 246 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 DNMT3LQ9UJW3 386 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 MYRFQ9Y2G1 1151 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PCDHGA3Q9Y5H0 932 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CLRN2A0PK11 232 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 POC1B-GALNT4F8VUJ3 575 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 MATN3O15232 486 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 VEGFDO43915 354 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 APOA1P02647 267 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 C8GP07360 202 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 EPHB2P29323 1055 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PTGIRP43119 386 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 LEPRP48357 1165 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 NEK3P51956 506 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 INHBCP55103 352 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 LILRA4P59901 499 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 UBE3AQ05086 875 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ANXA8L1Q5VT79 327 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ERAP2Q6P179 960 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 USP45Q70EL2 814 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ZSWIM9Q86XI8 627 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ADAMTS18Q8TE60 1221 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 DENND1AQ8TEH3 1009 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CHTF18Q8WVB6 975 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 DDX1Q92499 740 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 N4BP2L2Q92802 583 aaPredicted RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TTPALQ9BTX7 342 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ASIC5Q9NY37 505 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ANAPC2Q9UJX6 822 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 SLC13A4Q9UKG4 626 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 SCN2AQ99250 2005 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 RNASEH1O60930 286 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PEX11AO75192 247 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TPPPO94811 219 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 LDOC1O95751 146 aaPredicted RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CATP04040 527 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PABPC4LP0CB38 370 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ADORA2AP29274 412 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 HOXC8P31273 242 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 HOXD13P35453 343 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 VGLL4Q14135 290 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CHI3L2Q15782 390 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 MDH1BQ5I0G3 518 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 FAM46CQ5VWP2 391 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ANKS6Q68DC2 871 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 KCNK18Q7Z418 384 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PLPP6Q8IY26 295 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 RTL3Q8N8U3 475 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ST13P5Q8NFI4 369 aaPredicted RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 OR8J3Q8NGG0 315 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 MRPS31Q92665 395 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CENPNQ96H22 339 aaPredicted RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 RPRD1AQ96P16 312 aaPredicted RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 HMG20AQ9NP66 347 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TEKT2Q9UIF3 430 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 A8MVJ9 347 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PER2O15055 1255 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ITGB3P05106 788 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ABCB1P08183 1280 aaPredicted RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CHRM1P11229 460 aaPredicted RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 EFNA1P20827 205 aaPredicted RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CXCR5P32302 372 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TRPC1P48995 793 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 NDUFV1P49821 464 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 AQP5P55064 265 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CDH18Q13634 790 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 RPL13AP3Q6NVV1 102 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 GPR142Q7Z601 462 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PROSER1Q86XN7 944 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 LINC01465Q8N7H1 131 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ANKRD42Q8N9B4 389 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 C1orf54Q8WWF1 131 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CLPTM1LQ96KA5 538 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 GPR101Q96P66 508 aaPredicted RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 XYLT2Q9H1B5 865 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 HPS4Q9NQG7 708 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 POLE3Q9NRF9 147 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TEX264Q9Y6I9 313 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 HYKKA2RU49 373 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 PIRO00625 290 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 DIAPH2O60879 1101 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 ERN1O75460 977 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 S100A5P33763 92 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 ST13P50502 369 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 EPHB3P54753 998 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 TBX4P57082 545 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 PTPRNQ16849 979 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SLC35G1Q2M3R5 365 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 FAM182AQ5T1J6 154 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 CDCA5Q96FF9 252 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 FAM117AQ9C073 453 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms