RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 FAM167BQ9BTA0 163 aa11.7□□□□□ -0.54
SNRNP35-202ENST00000412157 LRFN3Q9BTN0 628 aa11.7□□□□□ -0.54
SNRNP35-202ENST00000412157 CIPCQ9C0C6 399 aa11.7□□□□□ -0.54
SNRNP35-202ENST00000412157 TNKS2Q9H2K2 1166 aa11.7□□□□□ -0.54
SNRNP35-202ENST00000412157 ATP13A3Q9H7F0 1226 aa11.7□□□□□ -0.54
SNRNP35-202ENST00000412157 ECT2Q9H8V3 914 aa11.7□□□□□ -0.54
SNRNP35-202ENST00000412157 KCNK9Q9NPC2 374 aa11.7□□□□□ -0.54
SNRNP35-202ENST00000412157 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.7□□□□□ -0.54
SNRNP35-202ENST00000412157 HACD3Q9P035 362 aa11.7□□□□□ -0.54
SNRNP35-202ENST00000412157 EVLQ9UI08 416 aaPredicted RBP11.7□□□□□ -0.54
SNRNP35-202ENST00000412157 FBXO10Q9UK96 956 aa11.7□□□□□ -0.54
SNRNP35-202ENST00000412157 ERVW-1Q9UQF0 538 aa11.7□□□□□ -0.54
SNRNP35-202ENST00000412157 SLC27A6Q9Y2P4 619 aa11.7□□□□□ -0.54
SNRNP35-202ENST00000412157 PCDHGC4Q9Y5F7 938 aa11.7□□□□□ -0.54
SNRNP35-202ENST00000412157 TRIM49D1C9J1S8 452 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 BNIP3LO60238 219 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 SRPRAP08240 638 aaKnown RBP11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 LAMP2P13473 410 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 PSMC3P17980 439 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 SERPINA4P29622 427 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 HOXD11P31277 338 aaPredicted RBP11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 GRIA4P48058 902 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 CSE1LP55060 971 aaKnown RBP11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 ST8SIA6P61647 398 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 PRAMEP78395 509 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 DLX2Q07687 328 aaPredicted RBP11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 FCHO2Q0JRZ9 810 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 RUNX3Q13761 415 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 GRM2Q14416 872 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 GRM3Q14832 879 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 SMAD1Q15797 465 aaKnown RBP11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 GEN1Q17RS7 908 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 GRTP1Q5TC63 336 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 EMC10Q5UCC4 262 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 ESRP1Q6NXG1 681 aaKnown RBP11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 GLT6D1Q7Z4J2 308 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 ADIPOR2Q86V24 386 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 UNC5BQ8IZJ1 945 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 NDUFAF2Q8N183 169 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 CALML6Q8TD86 181 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 BRSK1Q8TDC3 778 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 STYXQ8WUJ0 223 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 ALKBH8Q96BT7 664 aaKnown RBP11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 ZNF778Q96MU6 729 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 TUBGCP5Q96RT8 1024 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 KXD1Q9BQD3 176 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 FAM83CQ9BQN1 747 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 CAPS2Q9BXY5 557 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 POMKQ9H5K3 350 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 IARS2Q9NSE4 1012 aaKnown RBP11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 TREX1Q9NSU2 369 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 NKIRAS1Q9NYS0 192 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 DEC1Q9P2X7 70 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 RIMKLBQ9ULI2 386 aa11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 SMG5Q9UPR3 1016 aaKnown RBP11.69□□□□□ -0.54
SNRNP35-202ENST00000412157 CHD7Q9P2D1 2997 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 BDP1A6H8Y1 2624 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 UGT1A9O60656 530 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 TULP3O75386 442 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 FAM155BO75949 473 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 VAPBO95292 243 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 PGLSO95336 258 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 CISD3P0C7P0 127 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 POU3F3P20264 500 aaPredicted RBP11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 SPRP35270 261 aaPredicted RBP11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 CCNHP51946 323 aaPredicted RBP11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 RPL26P61254 145 aaKnown RBP11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 PDE1BQ01064 536 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 KDSRQ06136 332 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 DLG2Q15700 870 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 CNGA3Q16281 694 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 UGP2Q16851 508 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 PREPLQ4J6C6 727 aaPredicted RBP11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 HSP90AA5PQ58FG0 334 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 CARD16Q5EG05 197 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 TEDDM1Q5T9Z0 273 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 STRA8Q7Z7C7 330 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 C12orf40Q86WS4 652 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 ETFBKMTQ8IXQ9 262 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 C4orf33Q8N1A6 199 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 OTUD6BQ8N6M0 293 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 OR6K2Q8NGY2 324 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 UCMAQ8WVF2 138 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 MSLNLQ96KJ4 702 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 NSMCE3Q96MG7 304 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 SRPK1Q96SB4 655 aaKnown RBP11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 RBBP8Q99708 897 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 ZDHHC6Q9H6R6 413 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 UGT1A7Q9HAW7 530 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 UGT1A10Q9HAW8 530 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 UGT1A8Q9HAW9 530 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 HPS4Q9NQG7 708 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 IL1RAPL1Q9NZN1 696 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 SLC17A6Q9P2U8 582 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 SLC2A6Q9UGQ3 507 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 CD207Q9UJ71 328 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 RPL26L1Q9UNX3 145 aaKnown RBP11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 PCDHB9Q9Y5E1 797 aa11.68□□□□□ -0.54
SNRNP35-202ENST00000412157 A0A1W2PPM1 405 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms