RNA–Protein interactions for RNA: ENST00000393579.2

PCNPP3-201, Transcript of PEST containing nuclear protein pseudogene 3, humanhuman

BASIC

Gene PCNPP3, Length 471 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPP3-201ENST00000393579 SNX13Q9Y5W8 968 aa1.35□□□□□ -2.19
PCNPP3-201ENST00000393579 IGKV6-21A0A0C4DH24 114 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 A0A0U1RQF3 1178 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 TARSL2A2RTX5 802 aaKnown RBP1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 AGAP5A6NIR3 686 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 WDR1O75083 606 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 MOCS3O95396 460 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 MYL4P12829 197 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 SLC6A12P48065 614 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 BMXP51813 675 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 LIMK2P53671 638 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 NHLRC1Q6VVB1 395 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 Q7L0L9 218 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 TRABD2AQ86V40 505 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 MON1AQ86VX9 555 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 DENND6AQ8IWF6 608 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 KXD1Q9BQD3 176 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 GPATCH1Q9BRR8 931 aaKnown RBP1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 SLC25A18Q9H1K4 315 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 PLEKHA4Q9H4M7 779 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 SPC25Q9HBM1 224 aa1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 MORC2Q9Y6X9 1032 aaPredicted RBP1.34□□□□□ -2.19
PCNPP3-201ENST00000393579 ATRXP46100 2492 aa1.34□□□□□ -2.2
PCNPP3-201ENST00000393579 PCDH17O14917 1159 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 SYN3O14994 580 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 DHHO43323 396 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 PLRG1O43660 514 aaKnown RBP1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 SLC25A17O43808 307 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 STRNO43815 780 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 CEACAM1P13688 526 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 TRIM27P14373 513 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 EGR1P18146 543 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 AKT1P31749 480 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 RCAN1P53805 252 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 SNRPD1P62314 119 aaKnown RBP1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 ALKBH1Q13686 389 aaKnown RBP1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 GBX1Q14549 363 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 EFNB3Q15768 340 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 CCDC96Q2M329 555 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 GPATCH4Q5T3I0 446 aaKnown RBP1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 TBC1D9BQ66K14 1250 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 BHLHB9Q6PI77 547 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 KIAA1324Q6UXG2 1013 aaKnown RBP1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 CCDC149Q6ZUS6 474 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 SH2D5Q6ZV89 423 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 SFTPA2Q8IWL1 248 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 TPH2Q8IWU9 490 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 SCAIQ8N9R8 606 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 C2CD4CQ8TF44 421 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 DUSP19Q8WTR2 217 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 HOOK2Q96ED9 719 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 STRBPQ96SI9 672 aaKnown RBP1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 DDX24Q9GZR7 859 aaKnown RBP eCLIP1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 PNPLA8Q9NP80 782 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 PRDM8Q9NQV8 689 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 NYAP2Q9P242 653 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 PNMA8BQ9ULN7 279 aaPredicted RBP1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 AMDHD2Q9Y303 409 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 PYGO1Q9Y3Y4 419 aa1.33□□□□□ -2.2
PCNPP3-201ENST00000393579 IGLV5-45A0A087WSX0 123 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 CLCA1A8K7I4 914 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 KIF28PB7ZC32 967 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 AKR1B15C9JRZ8 316 aaPredicted RBP1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 TMEM178BH3BS89 294 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 AREL1O15033 823 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 CCNT1O60563 726 aaKnown RBP1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 RPP40O75818 363 aaKnown RBP1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 IL1AP01583 271 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 MMP2P08253 660 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 GRM4Q14833 912 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 MPEG1Q2M385 716 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 PLEKHG6Q3KR16 790 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 TUBB8Q3ZCM7 444 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 RGMBQ6NW40 437 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 RNF113BQ8IZP6 322 aaKnown RBP1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 CEP70Q8NHQ1 597 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 ABTB1Q969K4 478 aaPredicted RBP1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 RNF183Q96D59 192 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 SCRN2Q96FV2 425 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 YME1L1Q96TA2 773 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 FGFBP2Q9BYJ0 223 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 CXorf56Q9H5V9 222 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 FAM204AQ9H8W3 233 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 ATAD3AQ9NVI7 634 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 C2orf42Q9NWW7 574 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 UPB1Q9UBR1 384 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 ASIC3Q9UHC3 531 aa1.32□□□□□ -2.2
PCNPP3-201ENST00000393579 COL16A1Q07092 1604 aaPredicted RBP1.31□□□□□ -2.2
PCNPP3-201ENST00000393579 RGS11O94810 467 aa1.31□□□□□ -2.2
PCNPP3-201ENST00000393579 NDST3O95803 873 aa1.31□□□□□ -2.2
PCNPP3-201ENST00000393579 IGHV4-39P01824 125 aa1.31□□□□□ -2.2
PCNPP3-201ENST00000393579 MMP14P50281 582 aa1.31□□□□□ -2.2
PCNPP3-201ENST00000393579 ISL1P61371 349 aa1.31□□□□□ -2.2
PCNPP3-201ENST00000393579 RPP30P78346 268 aaKnown RBP1.31□□□□□ -2.2
PCNPP3-201ENST00000393579 CDK18Q07002 472 aa1.31□□□□□ -2.2
PCNPP3-201ENST00000393579 SPOCK1Q08629 439 aa1.31□□□□□ -2.2
PCNPP3-201ENST00000393579 GAGE5Q13069 117 aa1.31□□□□□ -2.2
PCNPP3-201ENST00000393579 GAGE6Q13070 117 aa1.31□□□□□ -2.2
PCNPP3-201ENST00000393579 CTF1Q16619 201 aa1.31□□□□□ -2.2
PCNPP3-201ENST00000393579 ADAMTSL4-AS1Q5T5F5 129 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms