RNA–Protein interactions for RNA: ENST00000380850.8

TTC39B-202, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-202ENST00000380850 CCDC162PA2VCL2 907 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 ALDH1A2O94788 518 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 RHOBTB1O94844 696 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 GOT2P00505 430 aaKnown RBP12.76□□□□□ -0.37
TTC39B-202ENST00000380850 ALPIP09923 528 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 HOXD8P13378 290 aaPredicted RBP12.76□□□□□ -0.37
TTC39B-202ENST00000380850 CYP2C18P33260 490 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 GRIK3Q13003 919 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 HECTD2Q5U5R9 776 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 STEAP4Q687X5 459 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 CDC26Q8NHZ8 85 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 ZBED2Q9BTP6 218 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.76□□□□□ -0.37
TTC39B-202ENST00000380850 FETUBQ9UGM5 382 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 PCDHB5Q9Y5E4 795 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 ZFP37Q9Y6Q3 630 aaPredicted RBP12.76□□□□□ -0.37
TTC39B-202ENST00000380850 PLXNA1Q9UIW2 1896 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 PLXNB2O15031 1838 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 hCG_2014768A0A024R1R8 64 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 MATN3O15232 486 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 BAIAP3O94812 1187 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 TGDSO95455 350 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 MLNP12872 115 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 SLC11A1P49279 550 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 GEMP55040 296 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 YBX1P67809 324 aaKnown RBP12.76□□□□□ -0.37
TTC39B-202ENST00000380850 CDC16Q13042 620 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 CYLC2Q14093 348 aaPredicted RBP12.76□□□□□ -0.37
TTC39B-202ENST00000380850 CCNIQ14094 377 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 SEMA3AQ14563 771 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 AAK1Q2M2I8 961 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 MILR1Q7Z6M3 343 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.76□□□□□ -0.37
TTC39B-202ENST00000380850 MTFMTQ96DP5 389 aaKnown RBP12.76□□□□□ -0.37
TTC39B-202ENST00000380850 OSBPL2Q9H1P3 480 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 ARHGAP26Q9UNA1 814 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 FCF1Q9Y324 198 aaKnown RBP12.76□□□□□ -0.37
TTC39B-202ENST00000380850 PCDHB12Q9Y5F1 795 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 SBF1O95248 1867 aa12.76□□□□□ -0.37
TTC39B-202ENST00000380850 DOCK6Q96HP0 2047 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 HDAC3O15379 428 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 NIPSNAP2O75323 286 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 ATXN8OSP0DMR3 200 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 PRDX3P30048 256 aaKnown RBP12.75□□□□□ -0.37
TTC39B-202ENST00000380850 MLLT6P55198 1093 aaPredicted RBP12.75□□□□□ -0.37
TTC39B-202ENST00000380850 KCTD11Q693B1 232 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 CLDN19Q8N6F1 224 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 NAT16Q8N8M0 369 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 RTL3Q8N8U3 475 aaKnown RBP12.75□□□□□ -0.37
TTC39B-202ENST00000380850 SOCS4Q8WXH5 440 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 ATP6V1E2Q96A05 226 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 TUBGCP3Q96CW5 907 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 NAT9Q9BTE0 207 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 OXSMQ9NWU1 459 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 LNPEPQ9UIQ6 1025 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 TRHDEQ9UKU6 1024 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 ANGPTL2Q9UKU9 493 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 PCDHB7Q9Y5E2 793 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 COPG1Q9Y678 874 aaKnown RBP12.75□□□□□ -0.37
TTC39B-202ENST00000380850 H3BMM5 538 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 GRID2O43424 1007 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 OR6B1O95007 311 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 KLHL2O95198 593 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 ATP6V1C1P21283 382 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 GRK2P25098 689 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 DPP6P42658 865 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 NPY2RP49146 381 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 XKR4Q5GH76 650 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 TSTD2Q5T7W7 516 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 LIPMQ5VYY2 423 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 TMEM207Q6UWW9 146 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 RNF180Q86T96 592 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 NTAN1Q96AB6 310 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 VPS33AQ96AX1 596 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 CMTM5Q96DZ9 223 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 ZNF184Q99676 751 aaPredicted RBP12.75□□□□□ -0.37
TTC39B-202ENST00000380850 ZYG11BQ9C0D3 744 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 CCDC68Q9H2F9 335 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 WDR41Q9HAD4 459 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 ATP13A1Q9HD20 1204 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 ZMYM5Q9UJ78 669 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 CCDC189A1A4V9 331 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 C2orf78A6NCI8 922 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 SAC3D1A6NKF1 404 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 FFAR3O14843 346 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 BIRC5O15392 142 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 GPR42O15529 346 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 RNASEH1O60930 286 aaKnown RBP12.75□□□□□ -0.37
TTC39B-202ENST00000380850 ALDH2P05091 517 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 LINGO3P0C6S8 592 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 MAGEA6P43360 314 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 APLP1P51693 650 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 NRG1Q02297 640 aaPredicted RBP12.75□□□□□ -0.37
TTC39B-202ENST00000380850 MAP7D1Q3KQU3 841 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 DNAL1Q4LDG9 190 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 C6orf52Q5T4I8 152 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 ARCQ7LC44 396 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 LSMEM2Q8N112 164 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 GBP5Q96PP8 586 aa12.75□□□□□ -0.37
TTC39B-202ENST00000380850 TNKS2Q9H2K2 1166 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms