RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 GPS1Q13098 491 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 GALNT3Q14435 633 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 SPARCL1Q14515 664 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 PPP1R7Q15435 360 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 KCTD11Q693B1 232 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 C4orf22Q6V702 233 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 PDCD7Q8N8D1 485 aaKnown RBP12.74□□□□□ -0.37
SMN1-202ENST00000380707 ZBTB44Q8NCP5 570 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 LPCAT1Q8NF37 534 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 PRSS33Q8NF86 280 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 IFT43Q96FT9 208 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 FEM1CQ96JP0 617 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 RUNDC3BQ96NL0 473 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 ADGRE3Q9BY15 652 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 BTBD1Q9H0C5 482 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 PCDH12Q9NPG4 1184 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 GGT7Q9UJ14 662 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 PHTF1Q9UMS5 762 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 ITM2BQ9Y287 266 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 FADS3Q9Y5Q0 445 aa12.74□□□□□ -0.37
SMN1-202ENST00000380707 A0A1W2PQ67 120 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 FAM47DPA6NHR8 397 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 ANKRD66B4E2M5 251 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 RIOK3O14730 519 aaKnown RBP12.73□□□□□ -0.37
SMN1-202ENST00000380707 AREL1O15033 823 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 SLC7A4O43246 635 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 USP12O75317 370 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 RPP40O75818 363 aaKnown RBP12.73□□□□□ -0.37
SMN1-202ENST00000380707 AP2A1O95782 977 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 EPOP01588 193 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 ATXN1LP0C7T5 689 aaKnown RBP12.73□□□□□ -0.37
SMN1-202ENST00000380707 CTPS1P17812 591 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 BCKDHBP21953 392 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 XPAP23025 273 aaPredicted RBP12.73□□□□□ -0.37
SMN1-202ENST00000380707 TERF1P54274 439 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 RPL26P61254 145 aaKnown RBP12.73□□□□□ -0.37
SMN1-202ENST00000380707 FAM193AP78312 1265 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 TCF15Q12870 199 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 SEMA5AQ13591 1074 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 PTK6Q13882 451 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 DHX34Q14147 1143 aaKnown RBP12.73□□□□□ -0.37
SMN1-202ENST00000380707 SLC1A5Q15758 541 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 SIRPB2Q5JXA9 342 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 RANBP10Q6VN20 620 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 JAMLQ86YT9 394 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 GAB3Q8WWW8 586 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 RAB7BQ96AH8 199 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 RMDN1Q96DB5 314 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 SPACA7Q96KW9 195 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 PPP1R2P1Q96PQ5 205 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 APOL2Q9BQE5 337 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 FICDQ9BVA6 458 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 GPR174Q9BXC1 333 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 FSD1LQ9BXM9 530 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 SGK2Q9HBY8 427 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 RPL26L1Q9UNX3 145 aaKnown RBP12.73□□□□□ -0.37
SMN1-202ENST00000380707 PPIL1Q9Y3C6 166 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 MUC6Q6W4X9 2439 aa12.73□□□□□ -0.37
SMN1-202ENST00000380707 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.72□□□□□ -0.37
SMN1-202ENST00000380707 TBC1D3DA0A087WVF3 549 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 TBC1D3IA0A087WXS9 549 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 TBC1D3EA0A087X179 549 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 TBC1D3KA0A087X1G2 549 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 A0A0J9YYE9 177 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 A0A0U1RQS6 177 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 TBC1D3FA6NER0 549 aaPredicted RBP12.72□□□□□ -0.37
SMN1-202ENST00000380707 A8MX80 341 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 TBC1D3LB9A6J9 549 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 E7EVH7 732 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 RAD51CO43502 376 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 AP1G1O43747 822 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 SEMA4FO95754 770 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 NDST3O95803 873 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 TRBC1P01850 177 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 APRTP07741 180 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 ALPIP09923 528 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 TBC1D3HP0C7X1 549 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 HNF1BP35680 557 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 MMP12P39900 470 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 CHRNA4P43681 627 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 SUOXP51687 545 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 EPHB1P54762 984 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 BASP1P80723 227 aaKnown RBP12.72□□□□□ -0.37
SMN1-202ENST00000380707 QPCTQ16769 361 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 TBC1D3GQ6DHY5 549 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 TBC1D3CQ6IPX1 549 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 TBC1D3Q8IZP1 549 aaPredicted RBP12.72□□□□□ -0.37
SMN1-202ENST00000380707 SLC25A41Q8N5S1 370 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 MNS1Q8NEH6 495 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 SCRN2Q96FV2 425 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 MCCC1Q96RQ3 725 aaPredicted RBP12.72□□□□□ -0.37
SMN1-202ENST00000380707 TBL1YQ9BQ87 522 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 TRIM51Q9BSJ1 452 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 C6orf106Q9H6K1 298 aaPredicted RBP12.72□□□□□ -0.37
SMN1-202ENST00000380707 LRRC40Q9H9A6 602 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 L2HGDHQ9H9P8 463 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 B4GALT6Q9UBX8 382 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 PCDHGA2Q9Y5H1 932 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 TCRBV7S3A2A0A539 114 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 CTAGE15A4D2H0 777 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms