RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 EMC1Q8N766 993 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 OR13F1Q8NGS4 319 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 OR52B2Q96RD2 323 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 PAAF1Q9BRP4 392 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 C17orf80Q9BSJ5 609 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 RNF208Q9H0X6 261 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 UNC93B1Q9H1C4 597 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 PKD2L2Q9NZM6 624 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 TBC1D14Q9P2M4 693 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 PCDHGC3Q9UN70 934 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 ANGPTL3Q9Y5C1 460 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 A6NL46 340 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 SOCS2O14508 198 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 PQBP1O60828 265 aaKnown RBP12.23□□□□□ -0.45
C9orf3-203ENST00000375315 GRIA3P42263 894 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 RBP5P82980 135 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 PRKCQQ04759 706 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 BFSP2Q13515 415 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 LRP8Q14114 963 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 SPCS2Q15005 226 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 DNAJC24Q6P3W2 148 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 TMC5Q6UXY8 1006 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 PLEKHG7Q6ZR37 379 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 Q8N9G6 341 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-203ENST00000375315 LRRC39Q96DD0 335 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 MAELQ96JY0 434 aaKnown RBP12.23□□□□□ -0.45
C9orf3-203ENST00000375315 MCEEQ96PE7 176 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 ADAM2Q99965 735 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 YTHDF1Q9BYJ9 559 aaKnown RBP12.23□□□□□ -0.45
C9orf3-203ENST00000375315 ELOVL4Q9GZR5 314 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 THG1LQ9NWX6 298 aaKnown RBP12.23□□□□□ -0.45
C9orf3-203ENST00000375315 ZNF229Q9UJW7 825 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 TCAF1Q9Y4C2 921 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 PCDHGA11Q9Y5H2 935 aa12.23□□□□□ -0.45
C9orf3-203ENST00000375315 GOLGA8QA0A0J9YX86 632 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 GOLGA8OA6NCC3 632 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 FAM159BA6NKW6 160 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 C9IYK1 514 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 GOLGA8NF8WBI6 632 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 M0QYV0 167 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 PAPSS1O43252 624 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-203ENST00000375315 ASNA1O43681 348 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 TPPPO94811 219 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 MYCLP1P12525 358 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-203ENST00000375315 MATN1P21941 496 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 GRM5P41594 1212 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 TUFMP49411 452 aaKnown RBP12.22□□□□□ -0.45
C9orf3-203ENST00000375315 DNASE1L3Q13609 305 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 TUBA3CQ13748 450 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 FAM187BQ17R55 369 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 INAVAQ3KP66 663 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 RFPL4BQ6ZWI9 263 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 DCP2Q8IU60 420 aaKnown RBP12.22□□□□□ -0.45
C9orf3-203ENST00000375315 ZNF781Q8N8C0 355 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 HHIPL1Q96JK4 782 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 YME1L1Q96TA2 773 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 NFKBIZQ9BYH8 718 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 DPEP3Q9H4B8 488 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 CD320Q9NPF0 282 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 RAB6BQ9NRW1 208 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 CNOT6Q9ULM6 557 aaKnown RBP12.22□□□□□ -0.45
C9orf3-203ENST00000375315 TRPV2Q9Y5S1 764 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 FAM172BPA6NC97 362 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 TBKBP1A7MCY6 615 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 KCNH1O95259 989 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 BMP2P12643 396 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 LMO2P25791 158 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 ARRB2P32121 409 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 MLLT10P55197 1068 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 ROR1Q01973 937 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 CBLBQ13191 982 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 TAF2Q6P1X5 1199 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 DARS2Q6PI48 645 aaKnown RBP12.22□□□□□ -0.45
C9orf3-203ENST00000375315 UNC5AQ6ZN44 842 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 ATG14Q6ZNE5 492 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 BTLAQ7Z6A9 289 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 CNTD1Q8N815 330 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 SMG8Q8ND04 991 aaKnown RBP12.22□□□□□ -0.45
C9orf3-203ENST00000375315 SPATA17Q96L03 361 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 ASB7Q9H672 318 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 MIOSQ9NXC5 875 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 SLC27A5Q9Y2P5 690 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 F8W810 466 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 CPNE6O95741 557 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 ZNF252P-AS1Q0IIN9 211 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 UBXN11Q5T124 520 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 HMBOX1Q6NT76 420 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 DSG4Q86SJ6 1040 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 RFX6Q8HWS3 928 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 CLIP4Q8N3C7 705 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 TDRD5Q8NAT2 981 aaKnown RBP12.22□□□□□ -0.45
C9orf3-203ENST00000375315 LSM14AQ8ND56 463 aaKnown RBP12.22□□□□□ -0.45
C9orf3-203ENST00000375315 BEST2Q8NFU1 509 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 CYGBQ8WWM9 190 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 DUS3LQ96G46 650 aaKnown RBP12.22□□□□□ -0.45
C9orf3-203ENST00000375315 TXNDC15Q96J42 360 aa12.22□□□□□ -0.45
C9orf3-203ENST00000375315 UPF3AQ9H1J1 476 aaKnown RBP12.22□□□□□ -0.45
C9orf3-203ENST00000375315 NOL6Q9H6R4 1146 aaKnown RBP12.22□□□□□ -0.45
C9orf3-203ENST00000375315 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.22□□□□□ -0.45
C9orf3-203ENST00000375315 SAC3D1A6NKF1 404 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms