RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 CHRNA1P02708 482 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CKMP06732 381 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 ITGA2BP08514 1039 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 PRR35P0CG20 571 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CYP11B2P19099 503 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 GLRA2P23416 452 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 ABCD3P28288 659 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 HOXC8P31273 242 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CIITAP33076 1130 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CAPZA2P47755 286 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 KCNC1P48547 511 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 SLC5A3P53794 718 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 SEC24CP53992 1094 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 ATXN3P54252 364 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 BACE1P56817 501 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 ERVFC1P60507 584 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 RAB1AP62820 205 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 SRSF2Q01130 221 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CFHR1Q03591 330 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 SCN1BQ07699 218 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 TRAP1Q12931 704 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 DHX34Q14147 1143 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 LY6DQ14210 128 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 TRIM25Q14258 630 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 FGL2Q14314 439 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 SF1Q15637 639 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 TBCEQ15813 527 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CSRP2Q16527 193 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 PFKFB3Q16875 520 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 PRSS53Q2L4Q9 553 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CCDC57Q2TAC2 916 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 OR7E24Q6IFN5 339 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 TIGD7Q6NT04 549 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 BORAQ6PGQ7 559 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 FBXO38Q6PIJ6 1188 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 KLHL17Q6TDP4 642 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 MTHFD1LQ6UB35 978 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 RSPO2Q6UXX9 243 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 LINC00696Q6ZRV3 163 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 DENND5BQ6ZUT9 1274 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CPNE8Q86YQ8 564 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 FAM9CQ8IZT9 166 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 FAM133AQ8N9E0 248 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 POGLUT1Q8NBL1 392 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 NUP43Q8NFH3 380 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 PSMA8Q8TAA3 256 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 KCNN1Q92952 543 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 RAB7BQ96AH8 199 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 SPACA9Q96E40 222 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 APOL6Q9BWW8 343 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 TRIM2Q9C040 744 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 SEMA4CQ9C0C4 833 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 CARD9Q9H257 536 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 SP110Q9HB58 689 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 NOD2Q9HC29 1040 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 RPRD1BQ9NQG5 326 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 NECTIN3Q9NQS3 549 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 HCFC1R1Q9NWW0 138 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 AMACRQ9UHK6 382 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 ACSL6Q9UKU0 697 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 LIMCH1Q9UPQ0 1083 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 PRELID1Q9Y255 219 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 BTBD3Q9Y2F9 522 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 C15orf41Q9Y2V0 281 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 PIAS3Q9Y6X2 628 aa3.6□□□□□ -1.83
ECHDC1-205ENST00000368295 ABCA2Q9BZC7 2435 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 MAPK8IP3Q9UPT6 1336 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 COL5A1P20908 1838 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 A0A1W2PRV1 198 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 A4D1N5 150 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 HMX3A6NHT5 357 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 E9PBE3 544 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 F8W8V4 182 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 STX16-NPEPL1H3BU86 382 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 SULT1B1O43704 296 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 SPAG6O75602 509 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 FLOT1O75955 427 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 TPOP07202 933 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 ANXA6P08133 673 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 MYBL1P10243 752 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 MTHFD2P13995 350 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 HPGDP15428 266 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 PNLIPP16233 465 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 CA8P35219 290 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 IGHMBP2P38935 993 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 CPT1AP50416 773 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 PLTPP55058 493 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 RPL11P62913 178 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 ASIC1P78348 528 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 OLR1P78380 273 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 HNRNPDQ14103 355 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 PTPAQ15257 358 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 GPR68Q15743 365 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 KCNMB1Q16558 191 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 ERCC6LQ2NKX8 1250 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 MYLK3Q32MK0 819 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 KRTAP21-3Q3LHN1 58 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 PAN2Q504Q3 1202 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 TOR2AQ5JU69 321 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms