RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 FAM45AQ8TCE6 357 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 ADAMTS16Q8TE57 1224 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 PPP1R14BQ96C90 147 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 ULBP1Q9BZM6 244 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 ATXN3LQ9H3M9 355 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 SOX17Q9H6I2 414 aaPredicted RBP10.95□□□□□ -0.66
RPE-202ENST00000359429 RPF2Q9H7B2 306 aaKnown RBP10.95□□□□□ -0.66
RPE-202ENST00000359429 CXorf21Q9HAI6 301 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 MRPL40Q9NQ50 206 aaKnown RBP10.95□□□□□ -0.66
RPE-202ENST00000359429 CCM2LQ9NUG4 571 aaPredicted RBP10.95□□□□□ -0.66
RPE-202ENST00000359429 ARMC1Q9NVT9 282 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 MAP10Q9P2G4 905 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 FBXW11Q9UKB1 542 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 SH3GLB1Q9Y371 365 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 PTGDR2Q9Y5Y4 395 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 CITO14578 2027 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 DNAJC25-GNG10A0A024R161 153 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 H3BMQ9 156 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 NPR3P17342 541 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 CHRM3P20309 590 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 MYF6P23409 242 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 CHRNA4P43681 627 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 CCR3P51677 355 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 MERTKQ12866 999 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 CBX3Q13185 183 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 MAPRE2Q15555 327 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 TBCELQ5QJ74 424 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 NOL9Q5SY16 702 aaKnown RBP10.95□□□□□ -0.66
RPE-202ENST00000359429 GPR107Q5VW38 600 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 ZNF470Q6ECI4 717 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 LARP4Q71RC2 724 aaKnown RBP eCLIP10.95□□□□□ -0.66
RPE-202ENST00000359429 PDZD4Q76G19 769 aaPredicted RBP10.95□□□□□ -0.66
RPE-202ENST00000359429 CMTR2Q8IYT2 770 aaKnown RBP10.95□□□□□ -0.66
RPE-202ENST00000359429 MFSD2AQ8NA29 543 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 APPL2Q8NEU8 664 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 SH3RF2Q8TEC5 729 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 TRPC4APQ8TEL6 797 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 TANKQ92844 425 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 COG8Q96MW5 612 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 HNRNPABQ99729 332 aaKnown RBP10.95□□□□□ -0.66
RPE-202ENST00000359429 EFHD1Q9BUP0 239 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 SLC25A23Q9BV35 468 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 PAIP1Q9H074 479 aaKnown RBP10.95□□□□□ -0.66
RPE-202ENST00000359429 HIPK3Q9H422 1215 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 TMEM30AQ9NV96 361 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 DERAQ9Y315 318 aa10.95□□□□□ -0.66
RPE-202ENST00000359429 TRIM64A6NGJ6 449 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 NCAM2O15394 837 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 IPO13O94829 963 aaKnown RBP10.94□□□□□ -0.66
RPE-202ENST00000359429 LRIG2O94898 1065 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 TTLL4Q14679 1199 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 SLC36A3Q495N2 470 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 NOMO2Q5JPE7 1267 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 TMEM26Q6ZUK4 368 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 FAM35AQ86V20 835 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 SIX6OS1Q8N1H7 587 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 ANKRD49Q8WVL7 239 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 NTAN1Q96AB6 310 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 C16orf70Q9BSU1 422 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 TBCCD1Q9NVR7 557 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 DDIT4Q9NX09 232 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 BLOC1S6Q9UL45 172 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 CDH7Q9ULB5 785 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 DOLKQ9UPQ8 538 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 SMIM28A0A1B0GU29 152 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 PPP6CO00743 305 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 ACOX3O15254 700 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 NCAM1P13591 858 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 GPX3P22352 226 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 DNAJB1P25685 340 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 YAP1P46937 504 aaKnown RBP10.94□□□□□ -0.66
RPE-202ENST00000359429 CD97P48960 835 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 ESRRGP62508 458 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 SCAPQ12770 1279 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 CAPRIN1Q14444 709 aaKnown RBP10.94□□□□□ -0.66
RPE-202ENST00000359429 PRPSAP1Q14558 356 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 RAB39AQ14964 217 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 TGFBIQ15582 683 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 UGP2Q16851 508 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 AARS2Q5JTZ9 985 aaKnown RBP10.94□□□□□ -0.66
RPE-202ENST00000359429 OGFOD2Q6N063 350 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 C2CD4AQ8NCU7 369 aaPredicted RBP10.94□□□□□ -0.66
RPE-202ENST00000359429 TBC1D15Q8TC07 691 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 EDEM1Q92611 657 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 SLC9A7Q96T83 725 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 TBL1YQ9BQ87 522 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 GPATCH1Q9BRR8 931 aaKnown RBP10.94□□□□□ -0.66
RPE-202ENST00000359429 FICDQ9BVA6 458 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 GSTO2Q9H4Y5 243 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 AGPAT4Q9NRZ5 378 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 TUBA8Q9NY65 449 aaPredicted RBP10.94□□□□□ -0.66
RPE-202ENST00000359429 CACNG4Q9UBN1 327 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 OR12D3Q9UGF7 316 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 FBXO5Q9UKT4 447 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 OAZ3Q9UMX2 235 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 TRAF6Q9Y4K3 522 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 PCDHGA4Q9Y5G9 962 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 NUP205Q92621 2012 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 PLXNA1Q9UIW2 1896 aa10.94□□□□□ -0.66
RPE-202ENST00000359429 SCN4AP35499 1836 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms