RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 CACNA1HO95180 2353 aa22.29■■□□□ 1.16
SHMT1-203ENST00000354098 A8MX80 341 aa22.29■■□□□ 1.16
SHMT1-203ENST00000354098 RIOK3O14730 519 aaKnown RBP22.29■■□□□ 1.16
SHMT1-203ENST00000354098 ANXA9O76027 345 aa22.29■■□□□ 1.16
SHMT1-203ENST00000354098 CA4P22748 312 aa22.29■■□□□ 1.16
SHMT1-203ENST00000354098 ACTN2P35609 894 aa22.29■■□□□ 1.16
SHMT1-203ENST00000354098 PPP2CBP62714 309 aa22.29■■□□□ 1.16
SHMT1-203ENST00000354098 PPP2CAP67775 309 aa22.29■■□□□ 1.16
SHMT1-203ENST00000354098 FAM193AP78312 1265 aa22.29■■□□□ 1.16
SHMT1-203ENST00000354098 MPP3Q13368 585 aa22.29■■□□□ 1.16
SHMT1-203ENST00000354098 OLIG2Q13516 323 aa22.29■■□□□ 1.16
SHMT1-203ENST00000354098 PRPSAP1Q14558 356 aa22.29■■□□□ 1.16
SHMT1-203ENST00000354098 LPAL2Q16609 132 aa22.29■■□□□ 1.16
SHMT1-203ENST00000354098 SYCP2LQ5T4T6 812 aa22.29■■□□□ 1.16
SHMT1-203ENST00000354098 PRR23BQ6ZRT6 265 aa22.29■■□□□ 1.16
SHMT1-203ENST00000354098 SLC41A1Q8IVJ1 513 aa22.29■■□□□ 1.16
SHMT1-203ENST00000354098 ABCA7Q8IZY2 2146 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 A0A1W2PQ67 120 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 LRRC72A6NJI9 287 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 NEMP1O14524 444 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 AP1G1O43747 822 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 PCDH8O95206 1070 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 ALPIP09923 528 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 GEMP55040 296 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 LMNB2Q03252 620 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 ARMCX6Q7L4S7 300 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 SPATA4Q8NEY3 305 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 IFT43Q96FT9 208 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 KDM4CQ9H3R0 1056 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 ETNK1Q9HBU6 452 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 PAK5Q9P286 719 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 AAR2Q9Y312 384 aaKnown RBP22.28■■□□□ 1.16
SHMT1-203ENST00000354098 NEU2Q9Y3R4 380 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 VPS13AQ96RL7 3174 aa22.28■■□□□ 1.16
SHMT1-203ENST00000354098 A0A0U1RQS6 177 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 LOC285095A0A1B0GVY8 99 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 C10orf142B7Z368 130 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 AGTP01019 485 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 KRT14P02533 472 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 PTGER3P43115 390 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 CHRNA4P43681 627 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 EPHB1P54762 984 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 SPARCL1Q14515 664 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 QPCTQ16769 361 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 PMS2CLQ68D20 193 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 RMDN1Q96DB5 314 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 FEM1CQ96JP0 617 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 ZC3H10Q96K80 434 aaKnown RBP22.27■■□□□ 1.16
SHMT1-203ENST00000354098 PREBQ9HCU5 417 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 RAB6BQ9NRW1 208 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 ZFR2Q9UPR6 939 aaKnown RBP22.27■■□□□ 1.16
SHMT1-203ENST00000354098 PPIL1Q9Y3C6 166 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 ARIH1Q9Y4X5 557 aaPredicted RBP22.27■■□□□ 1.16
SHMT1-203ENST00000354098 MUC6Q6W4X9 2439 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 FANCMQ8IYD8 2048 aa22.27■■□□□ 1.16
SHMT1-203ENST00000354098 ESPNB1AK53 854 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 ANKRD66B4E2M5 251 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 CCDC188H7C350 402 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 RNGTTO60942 597 aaKnown RBP22.26■■□□□ 1.15
SHMT1-203ENST00000354098 FSBPO95073 299 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 IGHV4-34P06331 123 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 MAT2AP31153 395 aaKnown RBP22.26■■□□□ 1.15
SHMT1-203ENST00000354098 HNF1BP35680 557 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 MMP12P39900 470 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 VPS41P49754 854 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 SUOXP51687 545 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 SEL1L3Q68CR1 1132 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 KCTD11Q693B1 232 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 ERAP2Q6P179 960 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 LPCAT2Q7L5N7 544 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 C11orf74Q86VG3 221 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 KLHDC8BQ8IXV7 354 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 SLC25A41Q8N5S1 370 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 PDCD7Q8N8D1 485 aaKnown RBP22.26■■□□□ 1.15
SHMT1-203ENST00000354098 CADM4Q8NFZ8 388 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 BIRC7Q96CA5 298 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 SCRN2Q96FV2 425 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 HSPA12BQ96MM6 686 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 APOL2Q9BQE5 337 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 WRAP53Q9BUR4 548 aaKnown RBP22.26■■□□□ 1.15
SHMT1-203ENST00000354098 FICDQ9BVA6 458 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 ADGRE3Q9BY15 652 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 IRF2BPLQ9H1B7 796 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 EPC1Q9H2F5 836 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 B4GALT6Q9UBX8 382 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 PCYOX1Q9UHG3 505 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 A0A0J9YYE9 177 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 A0A1W2PQU0 124 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 NPIPB15A6NHN6 443 aaPredicted RBP22.26■■□□□ 1.15
SHMT1-203ENST00000354098 METTL12A8MUP2 240 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 TSPAN6O43657 245 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 USP12O75317 370 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 TRBC1P01850 177 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 ATXN1LP0C7T5 689 aaKnown RBP22.26■■□□□ 1.15
SHMT1-203ENST00000354098 ADRA1AP35348 466 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 PTGIRP43119 386 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 RPL26P61254 145 aaKnown RBP22.26■■□□□ 1.15
SHMT1-203ENST00000354098 C2orf54Q08AI8 447 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 ELP6Q0PNE2 266 aa22.26■■□□□ 1.15
SHMT1-203ENST00000354098 RALGDSQ12967 914 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms