RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Ighg3A0A1Y7VJN6 399 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Vmn1r2A2AMT6 306 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Kif6E9PX57 802 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Hsd11b2P51661 386 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Lzts1P60853 599 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 YwhahP68510 246 aaKnown RBP15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Il17aQ62386 158 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Maml1Q6T264 1020 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 4930503B20RikQ80ZP0 234 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Hmgcll1Q8JZS7 343 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Prpsap1Q9D0M1 356 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Ampd2Q9DBT5 798 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Paqr5Q9DCU0 330 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Tlr6Q9EPW9 795 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 MkksQ9JI70 570 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Nt5cQ9JM14 200 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 RpgrQ9R0X5 1001 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Cdh22Q9WTP5 813 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Trpc7Q9WVC5 862 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Znf106O88466 1888 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gm6509A0A0J9YUV1 481 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Slc6a21A0A1B0GSD2 748 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Klhl32A2AJX0 620 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gm6351K9J7D1 481 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Limk2O54785 638 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Dnmt3bO88509 859 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Cyp2a12P56593 492 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Cpne7Q0VE82 557 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Dnajb14Q149L6 379 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Micall2Q3TN34 1009 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Kansl1lQ5DTI6 991 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Tp53i13Q5F267 385 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 AtminQ6P9S1 818 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Kank2Q8BX02 843 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Peli3Q8BXR6 445 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Tbc1d22aQ8R5A6 516 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Setd7Q8VHL1 366 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Q922M7 232 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 PclafQ9CQX4 110 aaKnown RBP15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Tmem135Q9CYV5 458 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 H2afb2S4R1M3 115 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Dennd4aE9Q8V6 1869 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Ighv11-2A0A075B5R8 117 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Ssxb8B1AY40 170 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Zscan5bB2RTN3 468 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Slc9a3G3X939 829 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Cd151O35566 253 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Smpd4Q6ZPR5 823 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Mppe1Q80XL7 396 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Slc46a2Q8CA03 479 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Imp4Q8VHZ7 291 aaKnown RBP15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Ap4s1Q9WVL1 144 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gm5751A2AHC8 147 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Pramef17A2ASJ1 475 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Mtx3D3YTP3 312 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gm14496K7N5U4 849 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Pde9aO70628 534 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gp1bbP56400 206 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Cdh6P97326 790 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Rap1gap2Q5SVL6 712 aaKnown RBP15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Cldn11Q60771 207 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 CcncQ62447 283 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Cdc14bQ6PFY9 485 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Zfp606Q7TSV0 794 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Sfrp1Q8C4U3 314 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Mob2Q8VI63 235 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Cyp2c50Q91X77 490 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Slamf1Q9QUM4 343 aa15.13■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Arfip1G5E8V9 373 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gnao1P18872 354 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Polr1bP70700 1135 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Pld2P97813 933 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Cntn2Q61330 1040 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Lingo3Q6GQU6 589 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Ckap2lQ7TS74 745 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Smoc2Q8CD91 447 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Tspan33Q8R3S2 283 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Olfr1352Q8VGX5 309 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 March2Q99M02 246 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Upk1aQ9D132 257 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Bcas2Q9D287 225 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Echdc3Q9D7J9 300 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Syvn1Q9DBY1 612 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Clcn5Q9WVD4 746 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Trim30bE9PVL6 203 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Vmn2r5K7N788 911 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Camk4P08414 469 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gdf5P43027 495 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Cntnap5bQ0V8T8 1292 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Q14AM7 275 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Clhc1Q5M6W3 596 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Cfap97Q6ZPR1 541 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Rpp38Q80UU2 280 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Fstl5Q8BFR2 847 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gpr21Q8BX79 349 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 TraipQ8VIG6 470 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Serpina3nQ91WP6 418 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Aco2Q99KI0 780 aaKnown RBP15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 MydgfQ9CPT4 166 aa15.12■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Tbk1Q9WUN2 729 aa15.12■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 60.2 ms