RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Pabpc1P29341 636 aaKnown RBP17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 NrlP54846 237 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Acot8P58137 320 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Hdgfl2Q3UMU9 669 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Mtnr1aQ61184 353 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Defa17Q64016 82 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Rps27lQ6ZWY3 84 aaKnown RBP17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Zdhhc17Q80TN5 632 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Fam83eQ80XS7 481 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Kank2Q8BX02 843 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Mcoln3Q8R4F0 553 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Dnajb7Q9QYI8 312 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Cdh22Q9WTP5 813 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Pcdh7A0A0A6YY83 1255 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Slc43a3A2AVZ9 502 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Gp5O08742 567 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 S100a9P31725 113 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Rab10P61027 200 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 YwhaqP68254 245 aaKnown RBP17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Gpatch4Q3TFK5 415 aaKnown RBP17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Fbxw2Q60584 422 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Jak3Q62137 1100 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Itga2Q62469 1178 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Actr3bQ641P0 418 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 ChpfQ6IQX7 774 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Rslcan18Q7M6X5 460 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Slc35e2Q8C811 405 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Olfr1361Q8VFH0 317 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Pcyox1Q9CQF9 505 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Ndufb5Q9CQH3 189 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 9030624G23RikQ9D308 155 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 SerhlQ9EPB5 311 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Gfra4Q9JJT2 260 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Bcl10Q9Z0H7 233 aa17.86■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Man1b1A2AJ15 658 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Gm17535J3KMR8 224 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 HcrtO55241 130 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Pla2g6P97819 807 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Gabpb1Q00420 383 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Sox17Q61473 419 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 FcgrtQ61559 365 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Rps9Q6ZWN5 194 aaKnown RBP17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Znf451Q8C0P7 1056 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 DnerQ8JZM4 737 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Acsf2Q8VCW8 615 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Pcdhb8Q91XZ2 779 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Rxfp2Q91ZZ5 737 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Slc35a5Q921R7 437 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 CutalQ9D1U5 156 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Zfp558E9Q1J0 407 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Il2P04351 169 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Gstm1P10649 218 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 GhrP16882 650 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Mov10P23249 1004 aaKnown RBP17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Bace1P56818 501 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Cpne9Q1RLL3 553 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 B3gntl1Q3U129 357 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Fnip1Q68FD7 1165 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Prrt3Q6PE13 971 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Klhl17Q6TDP3 640 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Olfr392Q7TRX6 312 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Amigo2Q80ZD9 519 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 SowahaQ8BLS7 548 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Znf467Q8JZL0 594 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Abhd11Q8K4F5 307 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Exd2Q8VEG4 650 aaKnown RBP17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 B4galt3Q91YY2 395 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Xpo5Q924C1 1204 aaKnown RBP17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Serpinb11Q9CQV3 388 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Maged2Q9ER67 616 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Cldn3Q9Z0G9 219 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Trbv4A0A075B5I2 113 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Vmn2r-ps130A0A140T8U3 855 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Mageb2A2AHM0 380 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Rpl36P47964 105 aaKnown RBP17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Jmjd8Q3TA59 316 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Kansl1lQ5DTI6 991 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Lrrc8bQ5DU41 803 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Scube3Q66PY1 993 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Ssx9Q6XAS3 170 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Amigo1Q80ZD8 492 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Lrrc8dQ8BGR2 859 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Rnf38Q8BI21 518 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Pgm5Q8BZF8 567 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Upb1Q8VC97 393 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Fbxo21Q8VDH1 627 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Ppp1r16bQ8VHQ3 568 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 PpidQ9CR16 370 aaKnown RBP17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Map3k14Q9WUL6 942 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Msl3Q9WVG9 525 aa17.85■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Ltbp1Q8CG19 1712 aa17.84■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Vmn2r24D3YUI0 854 aa17.84■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Slc22a15Q504N2 544 aa17.84■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Parp12Q8BZ20 711 aaKnown RBP17.84■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Lca5lQ8C0X0 741 aa17.84■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Dclre1cQ8K4J0 705 aa17.84■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Ttc4Q8R3H9 386 aa17.84■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Unc93b1Q8VCW4 598 aa17.84■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 CarfQ8VHI4 689 aa17.84■□□□□ 0.45
Sqstm1-201ENSMUST00000015981 Tmem98Q91X86 226 aa17.84■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms