RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Syt12Q920N7 421 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Pfdn1Q9CWM4 122 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 NvlQ9DBY8 855 aaKnown RBP9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Copg1Q9QZE5 874 aa9.53□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Gm6509A0A0J9YUV1 481 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Zfp626A0A0U1RQ84 676 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 1600015I10RikE9Q745 711 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 SmgcF6VRN1 385 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Gm3336J3QMQ6 198 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Gm6351K9J7D1 481 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 DmpkP54265 631 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Cdh5P55284 784 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Ranbp9P69566 653 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Cyp2j13Q3UNV4 503 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Cep295nlQ497N6 533 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Nr1h2Q60644 446 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Mef2dQ63943 514 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Tas2r129Q7M709 320 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Tas2r115Q7M719 310 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Slc16a9Q7TM99 508 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Cndp1Q8BUG2 492 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 4921511C20RikQ8BVT7 469 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 TpbglQ8C013 384 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Thop1Q8C1A5 687 aaKnown RBP9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Fbxo33Q8VE08 562 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 TmlheQ91ZE0 421 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Pex6Q99LC9 981 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Pard3bQ9CSB4 1203 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Snx29Q9D3S3 818 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Pou5f2Q9DAC9 329 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 PyglQ9ET01 850 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Pik3cgQ9JHG7 1102 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Cry2Q9R194 592 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Nupr1Q9WTK0 80 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 ClcnkbQ9WUB6 687 aa9.52□□□□□ -0.88
Col6a1-201ENSMUST00000001147 Gm17175E9Q528 179 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Olfr292F8VQ84 308 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Odc1P00860 461 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Galnt3P70419 633 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Nek10Q3UGM2 1111 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Gm1587Q3UT80 123 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Pfdn4Q3UWL8 134 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Rundc3bQ6PDC0 408 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Mtmr12Q80TA6 747 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Ctxn3Q8BXZ0 80 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Acsm2Q8K0L3 575 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Gstm4Q8R5I6 218 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 HnrnprQ8VHM5 632 aaKnown RBP9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Q922M7 232 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Nck1Q99M51 377 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Tpgs1Q99MS8 303 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Nt5cQ9JM14 200 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Pkp3Q9QY23 797 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 MycsQ9Z304 431 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Zfp963D3Z2T8 383 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Kcnt2D3Z649 1135 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Kcng2F7A6P6 480 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 2210016F16RikG3X8U3 338 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Rgs2O08849 211 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Serpina3kP07759 418 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Gnrh1P13562 90 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 GsrP47791 500 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Epb41P48193 858 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 YwhaqP68254 245 aaKnown RBP9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Tmc5Q32NZ6 967 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Mapre1Q61166 268 aaKnown RBP9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Pde1aQ61481 565 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Adgre1Q61549 931 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 PtprrQ62132 656 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Nr6a1Q64249 495 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 SyncripQ7TMK9 623 aaKnown RBP9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 TdrpQ8C5P7 182 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Dennd1cQ8CFK6 786 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Mtg1Q8R2R6 326 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Olfr866Q8VFI7 312 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Krcc1Q99JT5 256 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Q9D979 236 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Smpd3Q9JJY3 655 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Tuba8Q9JJZ2 449 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 CtsmQ9JL96 333 aa9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Akap8lQ9R0L7 642 aaKnown RBP9.52□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Col2a1P28481 1487 aa9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Gm3739L7N296 216 aa9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Fam71e2L7N480 754 aa9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Axin1O35625 863 aa9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Igf2bp1O88477 577 aaKnown RBP9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Tap2P36371 702 aa9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Fdft1P53798 416 aa9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Smpdl3bP58242 456 aa9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Tmprss15P97435 1069 aa9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Il6stQ00560 917 aa9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Tmem247Q497K7 211 aa9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Flot2Q60634 428 aaKnown RBP9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 SvoplQ6PDF3 494 aa9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Gja6Q6S5G4 283 aa9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Efr3bQ6ZQ18 817 aa9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Teddm1aQ810U2 305 aa9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Tbc1d17Q8BYH7 645 aa9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Epm2aip1Q8VEH5 606 aa9.51□□□□□ -0.89
Col6a1-201ENSMUST00000001147 Mark1Q8VHJ5 795 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 35.2 ms