RNA–Protein interactions for RNA: YPR134W

MSS18, Transcript of Nuclear encoded protein needed for splicing of mitochondrial intron, yeast

Gene MSS18, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS18	YPR134W	SAP155	P43612	1002 aa		4.8	□□□□□ -1.64
MSS18	YPR134W	ECL1	P48235	211 aa		4.8	□□□□□ -1.64
MSS18	YPR134W	RCM1	P53972	490 aa		4.8	□□□□□ -1.64
MSS18	YPR134W	GCD1	P09032	578 aa	Predicted RBP	4.79	□□□□□ -1.64
MSS18	YPR134W	TRL1	P09880	827 aa	Known RBP	4.79	□□□□□ -1.64
MSS18	YPR134W	REI1	P38344	393 aa	Predicted RBP	4.79	□□□□□ -1.64
MSS18	YPR134W	SAM37	P50110	327 aa		4.79	□□□□□ -1.64
MSS18	YPR134W	NUT1	P53114	1132 aa		4.79	□□□□□ -1.64
MSS18	YPR134W	GRS1	P38088	690 aa	Known RBP	4.78	□□□□□ -1.64
MSS18	YPR134W	NIT1	P40447	199 aa		4.78	□□□□□ -1.64
MSS18	YPR134W	MNL2	Q12205	849 aa		4.78	□□□□□ -1.64
MSS18	YPR134W	RPS4A	P0CX35	261 aa	Known RBP	4.77	□□□□□ -1.65
MSS18	YPR134W	RPS4B	P0CX36	261 aa	Known RBP	4.77	□□□□□ -1.65
MSS18	YPR134W	DUR3	P33413	735 aa		4.77	□□□□□ -1.65
MSS18	YPR134W	YKL077W	P36081	392 aa		4.77	□□□□□ -1.65
MSS18	YPR134W	CIC1	P38779	376 aa	Known RBP	4.77	□□□□□ -1.65
MSS18	YPR134W	YAF9	P53930	226 aa		4.77	□□□□□ -1.65
MSS18	YPR134W	NOC3	Q07896	663 aa	Predicted RBP	4.77	□□□□□ -1.65
MSS18	YPR134W	MCM5	P29496	775 aa	Known RBP	4.76	□□□□□ -1.65
MSS18	YPR134W	NNK1	P36003	928 aa		4.76	□□□□□ -1.65
MSS18	YPR134W	ALT1	P52893	592 aa		4.76	□□□□□ -1.65
MSS18	YPR134W	PRP43	P53131	767 aa	Known RBP	4.76	□□□□□ -1.65
MSS18	YPR134W	INP54	Q08227	384 aa	Known RBP	4.76	□□□□□ -1.65
MSS18	YPR134W	AVO1	Q08236	1176 aa		4.76	□□□□□ -1.65
MSS18	YPR134W	ALG6	Q12001	544 aa	Known RBP	4.76	□□□□□ -1.65
MSS18	YPR134W	RNQ1	P25367	405 aa		4.75	□□□□□ -1.65
MSS18	YPR134W	ADP1	P25371	1049 aa		4.75	□□□□□ -1.65
MSS18	YPR134W	SMY2	P32909	740 aa	Known RBP	4.75	□□□□□ -1.65
MSS18	YPR134W	LRG1	P35688	1017 aa		4.75	□□□□□ -1.65
MSS18	YPR134W	POL12	P38121	705 aa	Predicted RBP	4.75	□□□□□ -1.65
MSS18	YPR134W	ERP5	P38819	212 aa		4.75	□□□□□ -1.65
MSS18	YPR134W	MSH4	P40965	878 aa	Predicted RBP	4.75	□□□□□ -1.65
MSS18	YPR134W	YBL113C	Q7M4S9	792 aa		4.75	□□□□□ -1.65
MSS18	YPR134W	DFG16	Q99234	619 aa		4.75	□□□□□ -1.65
MSS18	YPR134W	NFS1	P25374	497 aa		4.74	□□□□□ -1.65
MSS18	YPR134W	SEG2	P34250	1132 aa		4.74	□□□□□ -1.65
MSS18	YPR134W	UBP5	P39944	805 aa		4.74	□□□□□ -1.65
MSS18	YPR134W	OYE3	P41816	400 aa	Predicted RBP	4.74	□□□□□ -1.65
MSS18	YPR134W	MDJ2	P42834	146 aa		4.74	□□□□□ -1.65
MSS18	YPR134W	YCS4	Q06156	1176 aa		4.74	□□□□□ -1.65
MSS18	YPR134W	GCD6	P32501	712 aa	Known RBP	4.73	□□□□□ -1.65
MSS18	YPR134W	ORC3	P54790	616 aa		4.73	□□□□□ -1.65
MSS18	YPR134W	NUT2	Q06213	157 aa		4.73	□□□□□ -1.65
MSS18	YPR134W	TRE1	Q08919	783 aa		4.73	□□□□□ -1.65
MSS18	YPR134W	HAT1	Q12341	374 aa		4.73	□□□□□ -1.65
MSS18	YPR134W	HSP78	P33416	811 aa		4.72	□□□□□ -1.65
MSS18	YPR134W	ATG14	P38270	344 aa		4.72	□□□□□ -1.65
MSS18	YPR134W	HSE1	P38753	452 aa		4.72	□□□□□ -1.65
MSS18	YPR134W	MTR4	P47047	1073 aa	Known RBP	4.72	□□□□□ -1.65
MSS18	YPR134W	KAR2	P16474	682 aa	Known RBP	4.71	□□□□□ -1.66
MSS18	YPR134W	YGR045C	P53229	120 aa		4.71	□□□□□ -1.66
MSS18	YPR134W	ELA1	P53861	379 aa	Predicted RBP	4.71	□□□□□ -1.66
MSS18	YPR134W	LAP2	Q10740	671 aa		4.71	□□□□□ -1.66
MSS18	YPR134W	EXO5	P38289	585 aa		4.7	□□□□□ -1.66
MSS18	YPR134W	MON1	P53129	644 aa		4.7	□□□□□ -1.66
MSS18	YPR134W	NOG1	Q02892	647 aa	Known RBP	4.7	□□□□□ -1.66
MSS18	YPR134W	EAR1	Q03212	550 aa		4.7	□□□□□ -1.66
MSS18	YPR134W	YVC1	Q12324	675 aa		4.7	□□□□□ -1.66
MSS18	YPR134W	FRT1	Q99332	602 aa		4.7	□□□□□ -1.66
MSS18	YPR134W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.69	□□□□□ -1.66
MSS18	YPR134W	TY1A-DR6	P0CX70	440 aa		4.69	□□□□□ -1.66
MSS18	YPR134W	TY1A-ER1	P0CX71	440 aa		4.69	□□□□□ -1.66
MSS18	YPR134W	TY1A-LR2	P0CX72	440 aa		4.69	□□□□□ -1.66
MSS18	YPR134W	TY1A-PL	P0CX73	440 aa		4.69	□□□□□ -1.66
MSS18	YPR134W	TY1A-JR1	P0CX74	440 aa		4.69	□□□□□ -1.66
MSS18	YPR134W	TY1A-LR3	P0CX75	440 aa		4.69	□□□□□ -1.66
MSS18	YPR134W	TY1A-ML2	P0CX76	440 aa		4.69	□□□□□ -1.66
MSS18	YPR134W	VPS35	P34110	944 aa		4.69	□□□□□ -1.66
MSS18	YPR134W	YAR028W	P39548	234 aa		4.69	□□□□□ -1.66
MSS18	YPR134W	TY1A-GR1	Q12085	440 aa		4.69	□□□□□ -1.66
MSS18	YPR134W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.69	□□□□□ -1.66
MSS18	YPR134W	TY1A-OL	Q92392	440 aa	Known RBP	4.69	□□□□□ -1.66
MSS18	YPR134W	GAS1	P22146	559 aa	Known RBP	4.68	□□□□□ -1.66
MSS18	YPR134W	VMA4	P22203	233 aa	Known RBP	4.68	□□□□□ -1.66
MSS18	YPR134W	PRO1	P32264	428 aa		4.68	□□□□□ -1.66
MSS18	YPR134W	SSY1	Q03770	852 aa		4.68	□□□□□ -1.66
MSS18	YPR134W	GPI13	Q07830	1017 aa		4.68	□□□□□ -1.66
MSS18	YPR134W	HRK1	Q08732	759 aa	Known RBP	4.68	□□□□□ -1.66
MSS18	YPR134W	YHL050C	P38721	697 aa		4.67	□□□□□ -1.66
MSS18	YPR134W	YHR219W	P38900	624 aa		4.67	□□□□□ -1.66
MSS18	YPR134W	STM1	P39015	273 aa	Known RBP	4.67	□□□□□ -1.66
MSS18	YPR134W	PEX7	P39108	375 aa		4.67	□□□□□ -1.66
MSS18	YPR134W	TPP1	Q03796	238 aa		4.67	□□□□□ -1.66
MSS18	YPR134W	PUS7	Q08647	676 aa	Known RBP	4.67	□□□□□ -1.66
MSS18	YPR134W	OXR1	Q08952	273 aa		4.67	□□□□□ -1.66
MSS18	YPR134W	SQT1	P35184	431 aa		4.66	□□□□□ -1.66
MSS18	YPR134W	PPX1	P38698	397 aa		4.66	□□□□□ -1.66
MSS18	YPR134W	RSM26	P47141	266 aa		4.66	□□□□□ -1.66
MSS18	YPR134W	FOL2	P51601	243 aa	Known RBP	4.66	□□□□□ -1.66
MSS18	YPR134W	MSH3	P25336	1018 aa		4.65	□□□□□ -1.67
MSS18	YPR134W	PRP40	P33203	583 aa	Known RBP	4.65	□□□□□ -1.67
MSS18	YPR134W	NEM1	P38757	446 aa		4.65	□□□□□ -1.67
MSS18	YPR134W	SLS1	P42900	643 aa		4.65	□□□□□ -1.67
MSS18	YPR134W	RET1	P22276	1149 aa	Known RBP	4.64	□□□□□ -1.67
MSS18	YPR134W	MDL2	P33311	773 aa		4.64	□□□□□ -1.67
MSS18	YPR134W	YHL012W	P38709	493 aa		4.64	□□□□□ -1.67
MSS18	YPR134W	PTC7	P38797	343 aa		4.64	□□□□□ -1.67
MSS18	YPR134W	PEX13	P80667	386 aa		4.64	□□□□□ -1.67
MSS18	YPR134W	RKM2	Q03942	479 aa		4.64	□□□□□ -1.67
MSS18	YPR134W	UTP5	Q04177	643 aa	Known RBP	4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms