RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB19YOR322C MIA40P36046 403 aa6.53□□□□□ -1.36
LDB19YOR322C SLN1P39928 1220 aaPredicted RBP6.53□□□□□ -1.36
LDB19YOR322C DOT6P40059 670 aaKnown RBP6.53□□□□□ -1.36
LDB19YOR322C YIL055CP40523 627 aaKnown RBP6.53□□□□□ -1.36
LDB19YOR322C ARO80Q04052 950 aa6.53□□□□□ -1.36
LDB19YOR322C CST9Q06032 482 aa6.53□□□□□ -1.36
LDB19YOR322C CIR2Q08822 631 aa6.53□□□□□ -1.36
LDB19YOR322C YOR378WQ08902 515 aa6.53□□□□□ -1.36
LDB19YOR322C PGC1Q08959 321 aa6.53□□□□□ -1.36
LDB19YOR322C MEF1P25039 761 aa6.53□□□□□ -1.36
LDB19YOR322C GRX7P38068 203 aa6.53□□□□□ -1.36
LDB19YOR322C BUD6P41697 788 aa6.53□□□□□ -1.36
LDB19YOR322C TAF11Q04226 346 aa6.53□□□□□ -1.36
LDB19YOR322C ESF1Q06344 628 aaKnown RBP6.53□□□□□ -1.36
LDB19YOR322C SSK22P25390 1331 aaPredicted RBP6.52□□□□□ -1.37
LDB19YOR322C TOM70P07213 617 aaKnown RBP6.52□□□□□ -1.37
LDB19YOR322C RPB2P08518 1224 aaKnown RBP6.52□□□□□ -1.37
LDB19YOR322C YEL043WP32618 956 aa6.52□□□□□ -1.37
LDB19YOR322C SMC2P38989 1170 aaKnown RBP6.52□□□□□ -1.37
LDB19YOR322C IML2P47031 731 aa6.52□□□□□ -1.37
LDB19YOR322C SHE10P53075 577 aa6.52□□□□□ -1.37
LDB19YOR322C DCP2P53550 970 aaKnown RBP6.52□□□□□ -1.37
LDB19YOR322C TFB3Q03290 321 aa6.52□□□□□ -1.37
LDB19YOR322C IKI3Q06706 1349 aaKnown RBP6.52□□□□□ -1.37
LDB19YOR322C NTE1Q04958 1679 aa6.52□□□□□ -1.37
LDB19YOR322C PIF1P07271 859 aa6.52□□□□□ -1.37
LDB19YOR322C DIT1P21623 536 aa6.52□□□□□ -1.37
LDB19YOR322C GLC3P32775 704 aa6.52□□□□□ -1.37
LDB19YOR322C PPG1P32838 368 aa6.52□□□□□ -1.37
LDB19YOR322C MNR2P35724 969 aa6.52□□□□□ -1.37
LDB19YOR322C RRN3P36070 627 aa6.52□□□□□ -1.37
LDB19YOR322C LAP3Q01532 483 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
LDB19YOR322C YAH1Q12184 172 aaKnown RBP6.52□□□□□ -1.37
LDB19YOR322C RIO1Q12196 484 aaKnown RBP6.52□□□□□ -1.37
LDB19YOR322C PLC1P32383 869 aa6.51□□□□□ -1.37
LDB19YOR322C FUS2Q05670 677 aa6.51□□□□□ -1.37
LDB19YOR322C ALR1Q08269 859 aa6.51□□□□□ -1.37
LDB19YOR322C TPS2P31688 896 aaKnown RBP6.51□□□□□ -1.37
LDB19YOR322C BMH2P34730 273 aaKnown RBP6.51□□□□□ -1.37
LDB19YOR322C RRP1P35178 278 aaPredicted RBP6.51□□□□□ -1.37
LDB19YOR322C RGA1P39083 1007 aa6.51□□□□□ -1.37
LDB19YOR322C KAR5Q04746 504 aa6.51□□□□□ -1.37
LDB19YOR322C TRP2P00899 507 aaKnown RBP6.5□□□□□ -1.37
LDB19YOR322C SEC8P32855 1065 aa6.5□□□□□ -1.37
LDB19YOR322C MAK5P38112 773 aaPredicted RBP6.5□□□□□ -1.37
LDB19YOR322C MAD1P40957 749 aa6.5□□□□□ -1.37
LDB19YOR322C NOP15P53927 220 aaPredicted RBP6.5□□□□□ -1.37
LDB19YOR322C BDF2Q07442 638 aa6.5□□□□□ -1.37
LDB19YOR322C SEC39Q12745 709 aa6.5□□□□□ -1.37
LDB19YOR322C RAD50P12753 1312 aa6.5□□□□□ -1.37
LDB19YOR322C JIP3O13555 125 aa6.5□□□□□ -1.37
LDB19YOR322C DSF1P0CX08 502 aa6.5□□□□□ -1.37
LDB19YOR322C YNR073CP0CX09 502 aa6.5□□□□□ -1.37
LDB19YOR322C PGS1P25578 521 aa6.5□□□□□ -1.37
LDB19YOR322C RSC6P25632 483 aa6.5□□□□□ -1.37
LDB19YOR322C CDC48P25694 835 aaKnown RBP6.5□□□□□ -1.37
LDB19YOR322C ITR1P30605 584 aa6.5□□□□□ -1.37
LDB19YOR322C SPC72P39723 622 aa6.5□□□□□ -1.37
LDB19YOR322C PEX8P53248 589 aa6.5□□□□□ -1.37
LDB19YOR322C ADA2Q02336 434 aa6.5□□□□□ -1.37
LDB19YOR322C FDC1Q03034 503 aa6.5□□□□□ -1.37
LDB19YOR322C NOC3Q07896 663 aaPredicted RBP6.5□□□□□ -1.37
LDB19YOR322C YPL277CQ08989 487 aa6.5□□□□□ -1.37
LDB19YOR322C AIM7Q12156 149 aa6.5□□□□□ -1.37
LDB19YOR322C ILS1P09436 1072 aaKnown RBP6.49□□□□□ -1.37
LDB19YOR322C CDC60P26637 1090 aaKnown RBP6.49□□□□□ -1.37
LDB19YOR322C NOP4P37838 685 aaKnown RBP6.49□□□□□ -1.37
LDB19YOR322C REI1P38344 393 aaPredicted RBP6.49□□□□□ -1.37
LDB19YOR322C BNA1P47096 177 aa6.49□□□□□ -1.37
LDB19YOR322C YJR142WP47173 342 aa6.49□□□□□ -1.37
LDB19YOR322C RNT1Q02555 471 aa6.49□□□□□ -1.37
LDB19YOR322C RRN11Q04712 507 aa6.49□□□□□ -1.37
LDB19YOR322C TAF2P23255 1407 aa6.49□□□□□ -1.37
LDB19YOR322C RGP1P16664 663 aa6.49□□□□□ -1.37
LDB19YOR322C PEX6P33760 1030 aa6.49□□□□□ -1.37
LDB19YOR322C CTM1P38818 585 aa6.49□□□□□ -1.37
LDB19YOR322C SEC5P89102 971 aa6.49□□□□□ -1.37
LDB19YOR322C CWC21Q03375 135 aaKnown RBP6.49□□□□□ -1.37
LDB19YOR322C IPL1P38991 367 aa6.48□□□□□ -1.37
LDB19YOR322C CCT3P39077 534 aaKnown RBP6.48□□□□□ -1.37
LDB19YOR322C MUB1Q03162 620 aa6.48□□□□□ -1.37
LDB19YOR322C YMR018WQ04364 514 aa6.48□□□□□ -1.37
LDB19YOR322C YLR352WQ06479 807 aa6.48□□□□□ -1.37
LDB19YOR322C SLK19Q08581 821 aaKnown RBP6.48□□□□□ -1.37
LDB19YOR322C MSB4Q12317 492 aa6.48□□□□□ -1.37
LDB19YOR322C ARG81P05085 880 aa6.48□□□□□ -1.37
LDB19YOR322C PRT1P06103 763 aaKnown RBP6.48□□□□□ -1.37
LDB19YOR322C HEM1P09950 548 aaPredicted RBP6.48□□□□□ -1.37
LDB19YOR322C KRE6P32486 720 aa6.48□□□□□ -1.37
LDB19YOR322C TEF4P36008 412 aaKnown RBP6.48□□□□□ -1.37
LDB19YOR322C UBP2Q01476 1272 aa6.48□□□□□ -1.37
LDB19YOR322C GAL1P04385 528 aa6.47□□□□□ -1.37
LDB19YOR322C SEC2P17065 759 aa6.47□□□□□ -1.37
LDB19YOR322C ASF2P32448 525 aaPredicted RBP6.47□□□□□ -1.37
LDB19YOR322C MTC2P34246 357 aa6.47□□□□□ -1.37
LDB19YOR322C UGA2P38067 497 aa6.47□□□□□ -1.37
LDB19YOR322C YAP1801P38856 637 aa6.47□□□□□ -1.37
LDB19YOR322C HAL5P38970 855 aaKnown RBP6.47□□□□□ -1.37
LDB19YOR322C YER156CP40093 338 aaKnown RBP6.47□□□□□ -1.37
LDB19YOR322C RLP7P40693 322 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms