RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W YKL077WP36081 392 aa5.69□□□□□ -1.5
VPS38YLR360W RSM26P47141 266 aa5.69□□□□□ -1.5
VPS38YLR360W YIG1Q08956 461 aa5.69□□□□□ -1.5
VPS38YLR360W ASF1P32447 279 aa5.68□□□□□ -1.5
VPS38YLR360W SQT1P35184 431 aa5.68□□□□□ -1.5
VPS38YLR360W KIP3P53086 805 aaKnown RBP5.68□□□□□ -1.5
VPS38YLR360W PEX13P80667 386 aa5.68□□□□□ -1.5
VPS38YLR360W ULP1Q02724 621 aa5.68□□□□□ -1.5
VPS38YLR360W YLL054CQ12244 843 aa5.68□□□□□ -1.5
VPS38YLR360W SHU2P38957 223 aa5.67□□□□□ -1.5
VPS38YLR360W FAA3P39002 694 aa5.67□□□□□ -1.5
VPS38YLR360W ARI1P53111 347 aaKnown RBP5.67□□□□□ -1.5
VPS38YLR360W YPL034WQ03083 165 aa5.67□□□□□ -1.5
VPS38YLR360W MCM2P29469 868 aa5.66□□□□□ -1.5
VPS38YLR360W RPS26AP39938 119 aaKnown RBP5.66□□□□□ -1.5
VPS38YLR360W RPS26BP39939 119 aaKnown RBP5.66□□□□□ -1.5
VPS38YLR360W GCV1P48015 400 aa5.66□□□□□ -1.5
VPS38YLR360W RRP15Q06511 250 aaPredicted RBP5.66□□□□□ -1.5
VPS38YLR360W HXK1P04806 485 aaKnown RBP5.65□□□□□ -1.51
VPS38YLR360W SEC8P32855 1065 aa5.65□□□□□ -1.51
VPS38YLR360W REI1P38344 393 aaPredicted RBP5.65□□□□□ -1.51
VPS38YLR360W NCE103P53615 221 aa5.65□□□□□ -1.51
VPS38YLR360W NRD1P53617 575 aaKnown RBP RIP-Chip data5.65□□□□□ -1.51not detected
VPS38YLR360W MEC3Q02574 474 aa5.65□□□□□ -1.51
VPS38YLR360W ALG6Q12001 544 aaKnown RBP5.65□□□□□ -1.51
VPS38YLR360W REC8Q12188 680 aa5.65□□□□□ -1.51
VPS38YLR360W TY1A-LR4P0C2I8 440 aaKnown RBP5.64□□□□□ -1.51
VPS38YLR360W TY1A-DR6P0CX70 440 aa5.64□□□□□ -1.51
VPS38YLR360W TY1A-ER1P0CX71 440 aa5.64□□□□□ -1.51
VPS38YLR360W TY1A-LR2P0CX72 440 aa5.64□□□□□ -1.51
VPS38YLR360W TY1A-PLP0CX73 440 aa5.64□□□□□ -1.51
VPS38YLR360W TY1A-JR1P0CX74 440 aa5.64□□□□□ -1.51
VPS38YLR360W TY1A-LR3P0CX75 440 aa5.64□□□□□ -1.51
VPS38YLR360W TY1A-ML2P0CX76 440 aa5.64□□□□□ -1.51
VPS38YLR360W SBP1P10080 294 aaKnown RBP5.64□□□□□ -1.51
VPS38YLR360W MSH3P25336 1018 aa5.64□□□□□ -1.51
VPS38YLR360W NAM7P30771 971 aaKnown RBP5.64□□□□□ -1.51
VPS38YLR360W COQ2P32378 372 aa5.64□□□□□ -1.51
VPS38YLR360W AKR1P39010 764 aa5.64□□□□□ -1.51
VPS38YLR360W YJR107WP47145 328 aa5.64□□□□□ -1.51
VPS38YLR360W YGR122WP53272 402 aa5.64□□□□□ -1.51
VPS38YLR360W OYE2Q03558 400 aaKnown RBP5.64□□□□□ -1.51
VPS38YLR360W ADI1Q03677 179 aa5.64□□□□□ -1.51
VPS38YLR360W SPR28Q04921 423 aa5.64□□□□□ -1.51
VPS38YLR360W YOR223WQ12015 292 aa5.64□□□□□ -1.51
VPS38YLR360W TY1A-GR1Q12085 440 aa5.64□□□□□ -1.51
VPS38YLR360W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.64□□□□□ -1.51
VPS38YLR360W TY1A-OLQ92392 440 aaKnown RBP5.64□□□□□ -1.51
VPS38YLR360W PEP7P32609 515 aa5.63□□□□□ -1.51
VPS38YLR360W EXO5P38289 585 aa5.63□□□□□ -1.51
VPS38YLR360W PEX28P38848 579 aa5.63□□□□□ -1.51
VPS38YLR360W MRPS18P42847 217 aa5.63□□□□□ -1.51
VPS38YLR360W NOG1Q02892 647 aaKnown RBP5.63□□□□□ -1.51
VPS38YLR360W YPL109CQ02981 657 aa5.63□□□□□ -1.51
VPS38YLR360W DOT1Q04089 582 aaKnown RBP5.63□□□□□ -1.51
VPS38YLR360W FYV10P40492 516 aa5.62□□□□□ -1.51
VPS38YLR360W SLS1P42900 643 aa5.62□□□□□ -1.51
VPS38YLR360W RAD2P07276 1031 aa5.61□□□□□ -1.51
VPS38YLR360W CYC8P14922 966 aa5.61□□□□□ -1.51
VPS38YLR360W PRE9P23638 258 aaKnown RBP5.61□□□□□ -1.51
VPS38YLR360W GPT2P36148 743 aa5.61□□□□□ -1.51
VPS38YLR360W ATG14P38270 344 aa5.61□□□□□ -1.51
VPS38YLR360W MTR4P47047 1073 aaKnown RBP5.61□□□□□ -1.51
VPS38YLR360W AVO1Q08236 1176 aa5.61□□□□□ -1.51
VPS38YLR360W ARL1P38116 183 aaKnown RBP5.6□□□□□ -1.51
VPS38YLR360W GIC2Q06648 383 aa5.6□□□□□ -1.51
VPS38YLR360W MCD1Q12158 566 aa5.6□□□□□ -1.51
VPS38YLR360W SAF1P38352 637 aa5.59□□□□□ -1.51
VPS38YLR360W NEM1P38757 446 aa5.59□□□□□ -1.51
VPS38YLR360W PIC2P40035 300 aa5.59□□□□□ -1.51
VPS38YLR360W YGL140CP53120 1219 aa5.59□□□□□ -1.51
VPS38YLR360W YGR045CP53229 120 aa5.59□□□□□ -1.51
VPS38YLR360W ELA1P53861 379 aaPredicted RBP5.59□□□□□ -1.51
VPS38YLR360W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
VPS38YLR360W CHS2P14180 963 aa5.58□□□□□ -1.52
VPS38YLR360W VMA4P22203 233 aaKnown RBP5.58□□□□□ -1.52
VPS38YLR360W KAE1P36132 386 aa5.58□□□□□ -1.52
VPS38YLR360W SPO74P45819 413 aa5.58□□□□□ -1.52
VPS38YLR360W YNR063WP53749 607 aa5.58□□□□□ -1.52
VPS38YLR360W UTP5Q04177 643 aaKnown RBP5.58□□□□□ -1.52
VPS38YLR360W PGM1P33401 570 aaKnown RBP5.57□□□□□ -1.52
VPS38YLR360W XKS1P42826 600 aa5.56□□□□□ -1.52
VPS38YLR360W ESF1Q06344 628 aaKnown RBP5.56□□□□□ -1.52
VPS38YLR360W YLR122CQ12312 125 aa5.56□□□□□ -1.52
VPS38YLR360W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
VPS38YLR360W HEM13P11353 328 aaKnown RBP5.55□□□□□ -1.52
VPS38YLR360W YAR028WP39548 234 aa5.55□□□□□ -1.52
VPS38YLR360W MSH4P40965 878 aaPredicted RBP5.55□□□□□ -1.52
VPS38YLR360W YGR130CP53278 816 aa5.55□□□□□ -1.52
VPS38YLR360W DED1P06634 604 aaKnown RBP5.54□□□□□ -1.52
VPS38YLR360W RPS4AP0CX35 261 aaKnown RBP5.54□□□□□ -1.52
VPS38YLR360W RPS4BP0CX36 261 aaKnown RBP5.54□□□□□ -1.52
VPS38YLR360W MRL1Q06815 381 aa5.54□□□□□ -1.52
VPS38YLR360W LAP2Q10740 671 aa5.54□□□□□ -1.52
VPS38YLR360W GLT1Q12680 2145 aaKnown RBP5.54□□□□□ -1.52
VPS38YLR360W SEC23P15303 768 aaKnown RBP5.53□□□□□ -1.52
VPS38YLR360W NFS1P25374 497 aa5.53□□□□□ -1.52
VPS38YLR360W WHI3P34761 661 aaKnown RBP5.53□□□□□ -1.52
VPS38YLR360W ADD66P36040 267 aa5.53□□□□□ -1.52
VPS38YLR360W RDH54P38086 958 aa5.53□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms