RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	NUT1	P53114	1132 aa		7.92	□□□□□ -1.14
RSA3	YLR221C	ALD6	P54115	500 aa	Known RBP	7.92	□□□□□ -1.14
RSA3	YLR221C	ALO1	P54783	526 aa	Known RBP	7.92	□□□□□ -1.14
RSA3	YLR221C	ARI1	P53111	347 aa	Known RBP	7.91	□□□□□ -1.14
RSA3	YLR221C	PMT7	Q06644	662 aa		7.91	□□□□□ -1.14
RSA3	YLR221C	MCM5	P29496	775 aa	Known RBP	7.9	□□□□□ -1.14
RSA3	YLR221C	VAC8	P39968	578 aa		7.9	□□□□□ -1.14
RSA3	YLR221C	GIP2	P40036	548 aa		7.9	□□□□□ -1.14
RSA3	YLR221C	SOK2	P53438	785 aa	Predicted RBP	7.9	□□□□□ -1.14
RSA3	YLR221C	ULP1	Q02724	621 aa		7.9	□□□□□ -1.14
RSA3	YLR221C	YPL109C	Q02981	657 aa		7.9	□□□□□ -1.14
RSA3	YLR221C	TY4B-P	A0A0B7P3V8	1104 aa		7.89	□□□□□ -1.15
RSA3	YLR221C	COB	P00163	385 aa		7.89	□□□□□ -1.15
RSA3	YLR221C	PGM1	P33401	570 aa	Known RBP	7.89	□□□□□ -1.15
RSA3	YLR221C	MON1	P53129	644 aa		7.89	□□□□□ -1.15
RSA3	YLR221C	ADI1	Q03677	179 aa		7.89	□□□□□ -1.15
RSA3	YLR221C	TY4A-H	Q6Q5P6	413 aa		7.89	□□□□□ -1.15
RSA3	YLR221C	CWC24	P53769	259 aa		7.88	□□□□□ -1.15
RSA3	YLR221C	ALD3	P54114	506 aa		7.88	□□□□□ -1.15
RSA3	YLR221C	SAP155	P43612	1002 aa		7.87	□□□□□ -1.15
RSA3	YLR221C	FUS1	P11710	512 aa		7.86	□□□□□ -1.15
RSA3	YLR221C	FPR4	Q06205	392 aa	Predicted RBP	7.86	□□□□□ -1.15
RSA3	YLR221C	WRS1	Q12109	432 aa	Known RBP	7.86	□□□□□ -1.15
RSA3	YLR221C	RSC6	P25632	483 aa		7.85	□□□□□ -1.15
RSA3	YLR221C	COQ2	P32378	372 aa		7.85	□□□□□ -1.15
RSA3	YLR221C	UGA4	P32837	571 aa		7.85	□□□□□ -1.15
RSA3	YLR221C	DUR3	P33413	735 aa		7.85	□□□□□ -1.15
RSA3	YLR221C	SQT1	P35184	431 aa		7.85	□□□□□ -1.15
RSA3	YLR221C	OMA1	P36163	345 aa		7.85	□□□□□ -1.15
RSA3	YLR221C	RIM11	P38615	370 aa		7.85	□□□□□ -1.15
RSA3	YLR221C	INP51	P40559	946 aa	Known RBP	7.84	□□□□□ -1.15
RSA3	YLR221C	YJL049W	P47048	450 aa		7.84	□□□□□ -1.15
RSA3	YLR221C	RSM26	P47141	266 aa		7.84	□□□□□ -1.15
RSA3	YLR221C	YAF9	P53930	226 aa		7.84	□□□□□ -1.15
RSA3	YLR221C	TY1A-NL1	Q12391	440 aa	Known RBP	7.84	□□□□□ -1.15
RSA3	YLR221C	YOL098C	Q12496	1037 aa		7.84	□□□□□ -1.15
RSA3	YLR221C	CDC34	P14682	295 aa		7.83	□□□□□ -1.16
RSA3	YLR221C	SHU2	P38957	223 aa		7.83	□□□□□ -1.16
RSA3	YLR221C	CMR1	Q12510	522 aa	Known RBP	7.83	□□□□□ -1.16
RSA3	YLR221C	NPR1	P22211	790 aa		7.82	□□□□□ -1.16
RSA3	YLR221C	INP52	P50942	1183 aa		7.82	□□□□□ -1.16
RSA3	YLR221C	SSF2	Q12153	453 aa	Predicted RBP	7.82	□□□□□ -1.16
RSA3	YLR221C	PRP5	P21372	849 aa	Predicted RBP	7.81	□□□□□ -1.16
RSA3	YLR221C	PIC2	P40035	300 aa		7.81	□□□□□ -1.16
RSA3	YLR221C	DSE4	P53753	1117 aa		7.81	□□□□□ -1.16
RSA3	YLR221C	GDE1	Q02979	1223 aa		7.81	□□□□□ -1.16
RSA3	YLR221C	GLO4	Q12320	285 aa		7.81	□□□□□ -1.16
RSA3	YLR221C	TAF13	P11747	167 aa		7.8	□□□□□ -1.16
RSA3	YLR221C	BIO5	P53744	561 aa	Known RBP	7.8	□□□□□ -1.16
RSA3	YLR221C	RTT10	Q08924	1013 aa		7.8	□□□□□ -1.16
RSA3	YLR221C	KAE1	P36132	386 aa		7.79	□□□□□ -1.16
RSA3	YLR221C	TFA2	P36145	328 aa		7.79	□□□□□ -1.16
RSA3	YLR221C	PAN5	P38787	379 aa		7.79	□□□□□ -1.16
RSA3	YLR221C	NOG1	Q02892	647 aa	Known RBP	7.79	□□□□□ -1.16
RSA3	YLR221C	TMA46	Q12000	345 aa	Known RBP	7.79	□□□□□ -1.16
RSA3	YLR221C	YLR122C	Q12312	125 aa		7.79	□□□□□ -1.16
RSA3	YLR221C	RAD27	P26793	382 aa		7.78	□□□□□ -1.16
RSA3	YLR221C	PEX28	P38848	579 aa		7.78	□□□□□ -1.16
RSA3	YLR221C	GCR1	P07261	785 aa		7.77	□□□□□ -1.17
RSA3	YLR221C	SEC23	P15303	768 aa	Known RBP	7.77	□□□□□ -1.17
RSA3	YLR221C	XKS1	P42826	600 aa		7.77	□□□□□ -1.17
RSA3	YLR221C	FAA4	P47912	694 aa	Known RBP	7.77	□□□□□ -1.17
RSA3	YLR221C	GUP1	P53154	560 aa		7.77	□□□□□ -1.17
RSA3	YLR221C	PEX13	P80667	386 aa		7.77	□□□□□ -1.17
RSA3	YLR221C	MRL1	Q06815	381 aa		7.77	□□□□□ -1.17
RSA3	YLR221C	SOG2	Q08817	791 aa		7.77	□□□□□ -1.17
RSA3	YLR221C	TRP3	P00937	484 aa		7.76	□□□□□ -1.17
RSA3	YLR221C	SRP40	P32583	406 aa	Predicted RBP	7.76	□□□□□ -1.17
RSA3	YLR221C	DUT1	P33317	147 aa		7.76	□□□□□ -1.17
RSA3	YLR221C	YKR073C	P36153	106 aa		7.76	□□□□□ -1.17
RSA3	YLR221C	SAF1	P38352	637 aa		7.76	□□□□□ -1.17
RSA3	YLR221C	AKR1	P39010	764 aa		7.76	□□□□□ -1.17
RSA3	YLR221C	FET4	P40988	552 aa		7.76	□□□□□ -1.17
RSA3	YLR221C	YJR124C	P47159	448 aa		7.76	□□□□□ -1.17
RSA3	YLR221C	YGR053C	P53234	283 aa		7.76	□□□□□ -1.17
RSA3	YLR221C	MED7	Q08278	222 aa		7.76	□□□□□ -1.17
RSA3	YLR221C	HVG1	P0CE11	249 aa		7.75	□□□□□ -1.17
RSA3	YLR221C	YKL077W	P36081	392 aa		7.75	□□□□□ -1.17
RSA3	YLR221C	YGL140C	P53120	1219 aa		7.75	□□□□□ -1.17
RSA3	YLR221C	REC8	Q12188	680 aa		7.75	□□□□□ -1.17
RSA3	YLR221C	MSH3	P25336	1018 aa		7.74	□□□□□ -1.17
RSA3	YLR221C	NAM7	P30771	971 aa	Known RBP	7.74	□□□□□ -1.17
RSA3	YLR221C	LEM3	P42838	414 aa		7.74	□□□□□ -1.17
RSA3	YLR221C	KRI1	P42846	591 aa	Known RBP	7.74	□□□□□ -1.17
RSA3	YLR221C	ENT3	P47160	408 aa		7.74	□□□□□ -1.17
RSA3	YLR221C	CHS2	P14180	963 aa		7.72	□□□□□ -1.17
RSA3	YLR221C	STI1	P15705	589 aa	Known RBP RIP-Chip data	7.72	□□□□□ -1.17	not detected
RSA3	YLR221C	POL5	P39985	1022 aa	Known RBP	7.72	□□□□□ -1.17
RSA3	YLR221C	OSW7	P43611	510 aa		7.72	□□□□□ -1.17
RSA3	YLR221C	YNR065C	P53751	1116 aa		7.72	□□□□□ -1.17
RSA3	YLR221C	NSE3	Q05541	303 aa		7.72	□□□□□ -1.17
RSA3	YLR221C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	7.72	□□□□□ -1.17	not detected
RSA3	YLR221C	OPI10	Q08202	246 aa		7.72	□□□□□ -1.17
RSA3	YLR221C	HTS1	P07263	546 aa	Known RBP	7.71	□□□□□ -1.18
RSA3	YLR221C	VMA4	P22203	233 aa	Known RBP	7.71	□□□□□ -1.18
RSA3	YLR221C	YKL091C	P33324	310 aa	Known RBP	7.71	□□□□□ -1.18
RSA3	YLR221C	TOS1	P38288	455 aa		7.71	□□□□□ -1.18
RSA3	YLR221C	NEO1	P40527	1151 aa		7.71	□□□□□ -1.18
RSA3	YLR221C	IOC3	P43596	787 aa		7.71	□□□□□ -1.18
RSA3	YLR221C	GNP1	P48813	663 aa		7.71	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms