RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W CIC1P38779 376 aaKnown RBP2.09□□□□□ -2.08
SLX4YLR135W GIP2P40036 548 aa2.09□□□□□ -2.08
SLX4YLR135W SKP1P52286 194 aa2.09□□□□□ -2.08
SLX4YLR135W SUT1P53032 299 aaKnown RBP2.09□□□□□ -2.08
SLX4YLR135W BSC2Q05611 235 aa2.09□□□□□ -2.08
SLX4YLR135W Q0182Q9ZZW1 134 aa2.09□□□□□ -2.08
SLX4YLR135W MSN1P22148 382 aa2.08□□□□□ -2.08
SLX4YLR135W KAP122P32767 1081 aa2.08□□□□□ -2.08
SLX4YLR135W RPT1P33299 467 aaKnown RBP2.08□□□□□ -2.08
SLX4YLR135W IRS4P36115 615 aaKnown RBP2.08□□□□□ -2.08
SLX4YLR135W ISW1P38144 1129 aa2.08□□□□□ -2.08
SLX4YLR135W RAD55P38953 406 aa2.08□□□□□ -2.08
SLX4YLR135W QDR2P40474 542 aa2.08□□□□□ -2.08
SLX4YLR135W FYV10P40492 516 aa2.08□□□□□ -2.08
SLX4YLR135W RGD2P43556 714 aa2.08□□□□□ -2.08
SLX4YLR135W YGR122WP53272 402 aa2.08□□□□□ -2.08
SLX4YLR135W OYE2Q03558 400 aaKnown RBP2.08□□□□□ -2.08
SLX4YLR135W YOR296WQ08748 1289 aa2.08□□□□□ -2.08
SLX4YLR135W GIP1P38229 639 aa2.07□□□□□ -2.08
SLX4YLR135W YBR287WP38355 427 aa2.07□□□□□ -2.08
SLX4YLR135W FIR1P40020 876 aa2.07□□□□□ -2.08
SLX4YLR135W PSY2P40164 858 aa2.07□□□□□ -2.08
SLX4YLR135W ESF1Q06344 628 aaKnown RBP2.07□□□□□ -2.08
SLX4YLR135W NOC3Q07896 663 aaPredicted RBP2.07□□□□□ -2.08
SLX4YLR135W TIF6Q12522 245 aaKnown RBP2.07□□□□□ -2.08
SLX4YLR135W YTA7P40340 1379 aa2.07□□□□□ -2.08
SLX4YLR135W BSD2P38356 321 aa2.06□□□□□ -2.08
SLX4YLR135W OCA5P38738 679 aa2.06□□□□□ -2.08
SLX4YLR135W OXR1Q08952 273 aa2.06□□□□□ -2.08
SLX4YLR135W YLR358CO13565 187 aa2.06□□□□□ -2.08
SLX4YLR135W FLP1P03870 423 aa2.06□□□□□ -2.08
SLX4YLR135W HXK1P04806 485 aaKnown RBP2.06□□□□□ -2.08
SLX4YLR135W CYC8P14922 966 aa2.06□□□□□ -2.08
SLX4YLR135W MNR2P35724 969 aa2.06□□□□□ -2.08
SLX4YLR135W AIM3P38266 947 aaKnown RBP2.06□□□□□ -2.08
SLX4YLR135W YER156CP40093 338 aaKnown RBP2.06□□□□□ -2.08
SLX4YLR135W MTO1P53070 669 aa2.06□□□□□ -2.08
SLX4YLR135W CUS1Q02554 436 aaPredicted RBP2.06□□□□□ -2.08
SLX4YLR135W GIC2Q06648 383 aa2.06□□□□□ -2.08
SLX4YLR135W PIN2Q12057 282 aa2.06□□□□□ -2.08
SLX4YLR135W CLN2P20438 545 aa2.05□□□□□ -2.08
SLX4YLR135W APM2P38700 605 aa2.05□□□□□ -2.08
SLX4YLR135W YIL165CP40446 119 aa2.05□□□□□ -2.08
SLX4YLR135W SAP155P43612 1002 aa2.05□□□□□ -2.08
SLX4YLR135W CTR9P89105 1077 aa2.05□□□□□ -2.08
SLX4YLR135W VPS16Q03308 798 aa2.05□□□□□ -2.08
SLX4YLR135W SPR28Q04921 423 aa2.05□□□□□ -2.08
SLX4YLR135W COBP00163 385 aa2.05□□□□□ -2.08
SLX4YLR135W RAD2P07276 1031 aa2.05□□□□□ -2.08
SLX4YLR135W AIM46P38885 310 aa2.05□□□□□ -2.08
SLX4YLR135W FAA3P39002 694 aa2.05□□□□□ -2.08
SLX4YLR135W NNF1P47149 201 aa2.05□□□□□ -2.08
SLX4YLR135W ITC1P53125 1264 aa2.05□□□□□ -2.08
SLX4YLR135W YCS4Q06156 1176 aa2.05□□□□□ -2.08
SLX4YLR135W EMG1Q06287 252 aaKnown RBP2.05□□□□□ -2.08
SLX4YLR135W URN1Q06525 465 aaKnown RBP2.05□□□□□ -2.08
SLX4YLR135W BDF2Q07442 638 aa2.05□□□□□ -2.08
SLX4YLR135W INP54Q08227 384 aaKnown RBP2.05□□□□□ -2.08
SLX4YLR135W MCD1Q12158 566 aa2.05□□□□□ -2.08
SLX4YLR135W KAR2P16474 682 aaKnown RBP2.04□□□□□ -2.08
SLX4YLR135W PRE9P23638 258 aaKnown RBP2.04□□□□□ -2.08
SLX4YLR135W MCM2P29469 868 aa2.04□□□□□ -2.08
SLX4YLR135W PRP40P33203 583 aaKnown RBP2.04□□□□□ -2.08
SLX4YLR135W SHM2P37291 469 aaKnown RBP2.04□□□□□ -2.08
SLX4YLR135W RPS26AP39938 119 aaKnown RBP2.04□□□□□ -2.08
SLX4YLR135W RPS26BP39939 119 aaKnown RBP2.04□□□□□ -2.08
SLX4YLR135W FPR4Q06205 392 aaPredicted RBP2.04□□□□□ -2.08
SLX4YLR135W JIP5Q06214 492 aaPredicted RBP2.04□□□□□ -2.08
SLX4YLR135W TOS4Q06266 489 aa2.04□□□□□ -2.08
SLX4YLR135W PYC2P32327 1180 aaKnown RBP2.03□□□□□ -2.08
SLX4YLR135W PET112P33893 541 aa2.03□□□□□ -2.08
SLX4YLR135W YJL049WP47048 450 aa2.03□□□□□ -2.08
SLX4YLR135W NUT1P53114 1132 aa2.03□□□□□ -2.08
SLX4YLR135W SOK2P53438 785 aaPredicted RBP2.03□□□□□ -2.08
SLX4YLR135W YPL109CQ02981 657 aa2.03□□□□□ -2.08
SLX4YLR135W SSF2Q12153 453 aaPredicted RBP2.03□□□□□ -2.08
SLX4YLR135W FUS1P11710 512 aa2.03□□□□□ -2.08
SLX4YLR135W TAF13P11747 167 aa2.03□□□□□ -2.08
SLX4YLR135W IDI1P15496 288 aa2.03□□□□□ -2.08
SLX4YLR135W PRP5P21372 849 aaPredicted RBP2.03□□□□□ -2.08
SLX4YLR135W RVS167P39743 482 aaKnown RBP2.03□□□□□ -2.08
SLX4YLR135W MMM1P41800 426 aa2.03□□□□□ -2.08
SLX4YLR135W MRPS18P42847 217 aa2.03□□□□□ -2.08
SLX4YLR135W CIT3P43635 486 aa2.03□□□□□ -2.08
SLX4YLR135W DAL4Q04895 635 aa2.03□□□□□ -2.08
SLX4YLR135W RSC2Q06488 889 aa2.03□□□□□ -2.08
SLX4YLR135W PMT7Q06644 662 aa2.03□□□□□ -2.08
SLX4YLR135W YOR059CQ08448 450 aaKnown RBP2.03□□□□□ -2.08
SLX4YLR135W HVG1P0CE11 249 aa2.02□□□□□ -2.09
SLX4YLR135W CDC34P14682 295 aa2.02□□□□□ -2.09
SLX4YLR135W RIM11P38615 370 aa2.02□□□□□ -2.09
SLX4YLR135W MAD1P40957 749 aa2.02□□□□□ -2.09
SLX4YLR135W ULP1Q02724 621 aa2.02□□□□□ -2.09
SLX4YLR135W ADI1Q03677 179 aa2.02□□□□□ -2.09
SLX4YLR135W MCM5P29496 775 aaKnown RBP2.02□□□□□ -2.09
SLX4YLR135W DUR3P33413 735 aa2.02□□□□□ -2.09
SLX4YLR135W TOD6P34219 525 aa2.02□□□□□ -2.09
SLX4YLR135W MAE1P36013 669 aaKnown RBP2.02□□□□□ -2.09
SLX4YLR135W ENT3P47160 408 aa2.02□□□□□ -2.09
SLX4YLR135W PPT1P53043 513 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 755.6 ms