RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W INM2Q05533 292 aa6.55□□□□□ -1.36
LDB18YLL049W DUS4Q06063 367 aa6.55□□□□□ -1.36
LDB18YLL049W SAM3Q08986 587 aa6.55□□□□□ -1.36
LDB18YLL049W IRE1P32361 1115 aa6.54□□□□□ -1.36
LDB18YLL049W MDL2P33311 773 aa6.54□□□□□ -1.36
LDB18YLL049W YNR021WP53723 404 aaKnown RBP6.54□□□□□ -1.36
LDB18YLL049W YDL124WQ07551 312 aaKnown RBP6.54□□□□□ -1.36
LDB18YLL049W STM1P39015 273 aaKnown RBP6.53□□□□□ -1.36
LDB18YLL049W YML037CQ03703 340 aa6.53□□□□□ -1.36
LDB18YLL049W ERG12P07277 443 aa6.52□□□□□ -1.37
LDB18YLL049W SEC18P18759 758 aaKnown RBP6.52□□□□□ -1.37
LDB18YLL049W NOC2P39744 710 aaKnown RBP6.52□□□□□ -1.37
LDB18YLL049W JHD1P40034 492 aa6.52□□□□□ -1.37
LDB18YLL049W RSC8P43609 557 aaKnown RBP6.52□□□□□ -1.37
LDB18YLL049W COQ8P27697 501 aa6.51□□□□□ -1.37
LDB18YLL049W CST26P38226 397 aa6.51□□□□□ -1.37
LDB18YLL049W SKP2P42843 763 aa6.51□□□□□ -1.37
LDB18YLL049W FOL2P51601 243 aaKnown RBP6.51□□□□□ -1.37
LDB18YLL049W LAP2Q10740 671 aa6.51□□□□□ -1.37
LDB18YLL049W RAD24P32641 659 aa6.5□□□□□ -1.37
LDB18YLL049W TFG1P41895 735 aaPredicted RBP6.5□□□□□ -1.37
LDB18YLL049W YAF9P53930 226 aa6.5□□□□□ -1.37
LDB18YLL049W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
LDB18YLL049W BUL2Q03758 920 aaKnown RBP6.5□□□□□ -1.37
LDB18YLL049W VID30P53076 958 aa6.49□□□□□ -1.37
LDB18YLL049W MCM6P53091 1017 aaKnown RBP6.49□□□□□ -1.37
LDB18YLL049W KEL3Q08979 651 aaPredicted RBP6.49□□□□□ -1.37
LDB18YLL049W GYP5Q12344 894 aa6.49□□□□□ -1.37
LDB18YLL049W MPH3P0CE00 602 aa6.48□□□□□ -1.37
LDB18YLL049W TPD3P31383 635 aa6.48□□□□□ -1.37
LDB18YLL049W SRP40P32583 406 aaPredicted RBP6.48□□□□□ -1.37
LDB18YLL049W BOI1P38041 980 aaKnown RBP6.48□□□□□ -1.37
LDB18YLL049W SAP30P38429 201 aa6.48□□□□□ -1.37
LDB18YLL049W TOM71P38825 639 aaKnown RBP6.48□□□□□ -1.37
LDB18YLL049W BOI2P39969 1040 aa6.48□□□□□ -1.37
LDB18YLL049W PTK2P47116 818 aaKnown RBP6.48□□□□□ -1.37
LDB18YLL049W DAN4P47179 1161 aa6.48□□□□□ -1.37
LDB18YLL049W PIP2P52960 996 aa6.48□□□□□ -1.37
LDB18YLL049W CDC19P00549 500 aaKnown RBP6.47□□□□□ -1.37
LDB18YLL049W PDC1P06169 563 aaKnown RBP6.47□□□□□ -1.37
LDB18YLL049W PIF1P07271 859 aa6.47□□□□□ -1.37
LDB18YLL049W SCS3P53012 380 aa6.47□□□□□ -1.37
LDB18YLL049W YGR125WP53273 1036 aa6.47□□□□□ -1.37
LDB18YLL049W YNL193WP53870 558 aa6.47□□□□□ -1.37
LDB18YLL049W MOT1P32333 1867 aa6.47□□□□□ -1.37
LDB18YLL049W CYB2P00175 591 aa6.46□□□□□ -1.38
LDB18YLL049W YUR1P26725 428 aa6.46□□□□□ -1.38
LDB18YLL049W POT1P27796 417 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
LDB18YLL049W UTR4P32626 227 aa6.46□□□□□ -1.38
LDB18YLL049W SLA1P32790 1244 aa6.46□□□□□ -1.38
LDB18YLL049W GRX7P38068 203 aa6.46□□□□□ -1.38
LDB18YLL049W FUN12P39730 1002 aaKnown RBP6.46□□□□□ -1.38
LDB18YLL049W REF2P42073 533 aaPredicted RBP6.46□□□□□ -1.38
LDB18YLL049W ALD6P54115 500 aaKnown RBP6.46□□□□□ -1.38
LDB18YLL049W MYO1P08964 1928 aa6.45□□□□□ -1.38
LDB18YLL049W PRE8P23639 250 aa6.45□□□□□ -1.38
LDB18YLL049W CAD1P24813 409 aaKnown RBP6.45□□□□□ -1.38
LDB18YLL049W RDH54P38086 958 aa6.45□□□□□ -1.38
LDB18YLL049W POA1P38218 177 aa6.45□□□□□ -1.38
LDB18YLL049W HGH1P48362 394 aaKnown RBP6.45□□□□□ -1.38
LDB18YLL049W DAK1P54838 584 aaKnown RBP6.45□□□□□ -1.38
LDB18YLL049W RPN7Q06103 429 aaKnown RBP6.45□□□□□ -1.38
LDB18YLL049W NOP8Q08287 484 aaPredicted RBP6.45□□□□□ -1.38
LDB18YLL049W MSC6Q08818 692 aaKnown RBP6.45□□□□□ -1.38
LDB18YLL049W RRI2Q12348 645 aa6.45□□□□□ -1.38
LDB18YLL049W PHR1P05066 565 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
LDB18YLL049W POX1P13711 748 aa6.44□□□□□ -1.38
LDB18YLL049W YKR018CP36114 725 aa6.44□□□□□ -1.38
LDB18YLL049W RMD1Q03441 430 aa6.44□□□□□ -1.38
LDB18YLL049W SKG3Q06315 1026 aa6.44□□□□□ -1.38
LDB18YLL049W RTP1Q12751 981 aa6.44□□□□□ -1.38
LDB18YLL049W LAM4P38800 1345 aa6.44□□□□□ -1.38
LDB18YLL049W RPP0P05317 312 aaKnown RBP6.43□□□□□ -1.38
LDB18YLL049W BCK2P33306 851 aa6.43□□□□□ -1.38
LDB18YLL049W BRL1P38770 471 aa6.43□□□□□ -1.38
LDB18YLL049W YDL129WQ07555 291 aa6.43□□□□□ -1.38
LDB18YLL049W RAD18P10862 487 aa6.42□□□□□ -1.38
LDB18YLL049W SRM1P21827 482 aa6.42□□□□□ -1.38
LDB18YLL049W OYE3P41816 400 aaPredicted RBP6.42□□□□□ -1.38
LDB18YLL049W YPP1P46951 817 aa6.42□□□□□ -1.38
LDB18YLL049W NUP42P49686 430 aaKnown RBP6.42□□□□□ -1.38
LDB18YLL049W YGL039WP53183 348 aaKnown RBP6.42□□□□□ -1.38
LDB18YLL049W SOL4P53315 255 aa6.42□□□□□ -1.38
LDB18YLL049W YNL115CP53925 644 aa6.42□□□□□ -1.38
LDB18YLL049W TEL1P38110 2787 aa6.42□□□□□ -1.38
LDB18YLL049W CHL1P22516 861 aaPredicted RBP6.41□□□□□ -1.38
LDB18YLL049W TIM23P32897 222 aa6.41□□□□□ -1.38
LDB18YLL049W DCW1P36091 449 aa6.41□□□□□ -1.38
LDB18YLL049W DBP7P36120 742 aaKnown RBP6.41□□□□□ -1.38
LDB18YLL049W EDS1P38073 919 aa6.41□□□□□ -1.38
LDB18YLL049W ART5P53244 586 aaKnown RBP6.41□□□□□ -1.38
LDB18YLL049W SLD5Q03406 294 aa6.41□□□□□ -1.38
LDB18YLL049W HTA1P04911 132 aaKnown RBP6.4□□□□□ -1.38
LDB18YLL049W HTA2P04912 132 aa6.4□□□□□ -1.38
LDB18YLL049W TGL1P34163 548 aa6.4□□□□□ -1.38
LDB18YLL049W GPT2P36148 743 aa6.4□□□□□ -1.38
LDB18YLL049W VPS53P47061 822 aa6.4□□□□□ -1.38
LDB18YLL049W INP52P50942 1183 aa6.4□□□□□ -1.38
LDB18YLL049W YNL034WP53963 612 aa6.4□□□□□ -1.38
LDB18YLL049W YNL018CP53976 612 aa6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms