RNA–Protein interactions for RNA: YIL021W

RPB3, Transcript of RNA polymerase II third largest subunit B44, yeast

Gene RPB3, Length 957 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB3	YIL021W	SSA1	P10591	642 aa	Known RBP	4.91	□□□□□ -1.62
RPB3	YIL021W	SRS2	P12954	1174 aa		4.91	□□□□□ -1.62
RPB3	YIL021W	BSD2	P38356	321 aa		4.91	□□□□□ -1.62
RPB3	YIL021W	TPS3	P38426	1054 aa	Known RBP	4.91	□□□□□ -1.62
RPB3	YIL021W	PRY1	P47032	299 aa		4.91	□□□□□ -1.62
RPB3	YIL021W	GIS4	Q04233	774 aa		4.91	□□□□□ -1.62
RPB3	YIL021W	ALG14	P38242	237 aa		4.9	□□□□□ -1.63
RPB3	YIL021W	AMN1	P38285	549 aa	Predicted RBP	4.9	□□□□□ -1.63
RPB3	YIL021W	DYS1	P38791	387 aa		4.9	□□□□□ -1.63
RPB3	YIL021W	YER156C	P40093	338 aa	Known RBP	4.9	□□□□□ -1.63
RPB3	YIL021W	MCA1	Q08601	432 aa		4.9	□□□□□ -1.63
RPB3	YIL021W	NHA1	Q99271	985 aa		4.9	□□□□□ -1.63
RPB3	YIL021W	KTR2	P33550	425 aa		4.89	□□□□□ -1.63
RPB3	YIL021W	GEF1	P37020	779 aa		4.89	□□□□□ -1.63
RPB3	YIL021W	LDH1	P38139	375 aa		4.89	□□□□□ -1.63
RPB3	YIL021W	GIP1	P38229	639 aa		4.89	□□□□□ -1.63
RPB3	YIL021W	BUD9	P53226	547 aa		4.89	□□□□□ -1.63
RPB3	YIL021W	URN1	Q06525	465 aa	Known RBP	4.89	□□□□□ -1.63
RPB3	YIL021W	GLT1	Q12680	2145 aa	Known RBP	4.89	□□□□□ -1.63
RPB3	YIL021W	SPE2	P21182	396 aa		4.88	□□□□□ -1.63
RPB3	YIL021W	MSN1	P22148	382 aa		4.88	□□□□□ -1.63
RPB3	YIL021W	BOI1	P38041	980 aa	Known RBP	4.88	□□□□□ -1.63
RPB3	YIL021W	IPL1	P38991	367 aa		4.88	□□□□□ -1.63
RPB3	YIL021W	MLP1	Q02455	1875 aa	Known RBP	4.88	□□□□□ -1.63
RPB3	YIL021W	TYS1	P36421	394 aa	Known RBP	4.87	□□□□□ -1.63
RPB3	YIL021W	APC11	Q12157	165 aa		4.87	□□□□□ -1.63
RPB3	YIL021W	RPP0	P05317	312 aa	Known RBP	4.86	□□□□□ -1.63
RPB3	YIL021W	TAT1	P38085	619 aa		4.86	□□□□□ -1.63
RPB3	YIL021W	ISW1	P38144	1129 aa		4.86	□□□□□ -1.63
RPB3	YIL021W	YIL165C	P40446	119 aa		4.86	□□□□□ -1.63
RPB3	YIL021W	LSB6	P42951	607 aa		4.86	□□□□□ -1.63
RPB3	YIL021W	TAF8	Q03750	510 aa		4.86	□□□□□ -1.63
RPB3	YIL021W	PNP1	Q05788	311 aa		4.86	□□□□□ -1.63
RPB3	YIL021W	BCK1	Q01389	1478 aa		4.86	□□□□□ -1.63
RPB3	YIL021W	NAP1	P25293	417 aa	Known RBP	4.85	□□□□□ -1.63
RPB3	YIL021W	YAP3	P38749	330 aa		4.85	□□□□□ -1.63
RPB3	YIL021W	EMG1	Q06287	252 aa	Known RBP	4.85	□□□□□ -1.63
RPB3	YIL021W	GAS5	Q08193	484 aa		4.85	□□□□□ -1.63
RPB3	YIL021W	RAD9	P14737	1309 aa		4.85	□□□□□ -1.63
RPB3	YIL021W	CHZ1	P40019	153 aa	Predicted RBP	4.84	□□□□□ -1.63
RPB3	YIL021W	VPS27	P40343	622 aa	Known RBP	4.84	□□□□□ -1.63
RPB3	YIL021W	RGD2	P43556	714 aa		4.84	□□□□□ -1.63
RPB3	YIL021W	YPL034W	Q03083	165 aa		4.84	□□□□□ -1.63
RPB3	YIL021W	YML020W	Q03722	664 aa		4.84	□□□□□ -1.63
RPB3	YIL021W	CDC45	Q08032	650 aa		4.84	□□□□□ -1.63
RPB3	YIL021W	LSO1	Q3E827	93 aa		4.84	□□□□□ -1.63
RPB3	YIL021W	AI3	P03877	415 aa		4.83	□□□□□ -1.64
RPB3	YIL021W	RRM3	P38766	723 aa		4.83	□□□□□ -1.64
RPB3	YIL021W	HXT8	P40886	569 aa		4.83	□□□□□ -1.64
RPB3	YIL021W	IOC4	Q04213	475 aa		4.83	□□□□□ -1.64
RPB3	YIL021W	CFT1	Q06632	1357 aa	Known RBP	4.82	□□□□□ -1.64
RPB3	YIL021W	TY4B-P	A0A0B7P3V8	1104 aa		4.82	□□□□□ -1.64
RPB3	YIL021W	BOL3	P39724	118 aa		4.82	□□□□□ -1.64
RPB3	YIL021W	TY4A-H	Q6Q5P6	413 aa		4.82	□□□□□ -1.64
RPB3	YIL021W	HAP1	P0CE41	1502 aa		4.82	□□□□□ -1.64
RPB3	YIL021W	RPB10	P22139	70 aa		4.81	□□□□□ -1.64
RPB3	YIL021W	GIP2	P40036	548 aa		4.81	□□□□□ -1.64
RPB3	YIL021W	PPT1	P53043	513 aa		4.81	□□□□□ -1.64
RPB3	YIL021W	RPL34A	P87262	121 aa	Predicted RBP	4.81	□□□□□ -1.64
RPB3	YIL021W	SLP1	Q12232	587 aa		4.81	□□□□□ -1.64
RPB3	YIL021W	SNF2	P22082	1703 aa		4.8	□□□□□ -1.64
RPB3	YIL021W	SBP1	P10080	294 aa	Known RBP	4.8	□□□□□ -1.64
RPB3	YIL021W	SFA1	P32771	386 aa		4.8	□□□□□ -1.64
RPB3	YIL021W	RRN6	P32786	894 aa		4.8	□□□□□ -1.64
RPB3	YIL021W	PGM1	P33401	570 aa	Known RBP	4.8	□□□□□ -1.64
RPB3	YIL021W	NTA1	P40354	457 aa		4.8	□□□□□ -1.64
RPB3	YIL021W	TED1	P40533	473 aa		4.8	□□□□□ -1.64
RPB3	YIL021W	YJL181W	P46987	611 aa		4.8	□□□□□ -1.64
RPB3	YIL021W	SUT1	P53032	299 aa	Known RBP	4.8	□□□□□ -1.64
RPB3	YIL021W	SOK2	P53438	785 aa	Predicted RBP	4.8	□□□□□ -1.64
RPB3	YIL021W	RSC2	Q06488	889 aa		4.8	□□□□□ -1.64
RPB3	YIL021W	RVB2	Q12464	471 aa	Known RBP	4.8	□□□□□ -1.64
RPB3	YIL021W	YEF3	P16521	1044 aa	Known RBP	4.79	□□□□□ -1.64
RPB3	YIL021W	SAC7	P17121	654 aa		4.79	□□□□□ -1.64
RPB3	YIL021W	TFA2	P36145	328 aa		4.79	□□□□□ -1.64
RPB3	YIL021W	FUN12	P39730	1002 aa	Known RBP	4.79	□□□□□ -1.64
RPB3	YIL021W	INP51	P40559	946 aa	Known RBP	4.79	□□□□□ -1.64
RPB3	YIL021W	YRB30	P53107	440 aa	Predicted RBP	4.79	□□□□□ -1.64
RPB3	YIL021W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
RPB3	YIL021W	BIO5	P53744	561 aa	Known RBP	4.79	□□□□□ -1.64
RPB3	YIL021W	ALD3	P54114	506 aa		4.79	□□□□□ -1.64
RPB3	YIL021W	YDL144C	Q07589	356 aa		4.79	□□□□□ -1.64
RPB3	YIL021W	AIM46	P38885	310 aa		4.78	□□□□□ -1.64
RPB3	YIL021W	FPR3	P38911	411 aa	Known RBP	4.78	□□□□□ -1.64
RPB3	YIL021W	FIR1	P40020	876 aa		4.78	□□□□□ -1.64
RPB3	YIL021W	ARI1	P53111	347 aa	Known RBP	4.78	□□□□□ -1.64
RPB3	YIL021W	TY1A-NL1	Q12391	440 aa	Known RBP	4.78	□□□□□ -1.64
RPB3	YIL021W	TIF6	Q12522	245 aa	Known RBP	4.78	□□□□□ -1.64
RPB3	YIL021W	YML133C	Q03099	1374 aa		4.78	□□□□□ -1.64
RPB3	YIL021W	YLL067C	Q07888	1374 aa		4.78	□□□□□ -1.64
RPB3	YIL021W	YLL066C	Q99208	1374 aa		4.78	□□□□□ -1.64
RPB3	YIL021W	NOP8	Q08287	484 aa	Predicted RBP	4.77	□□□□□ -1.65
RPB3	YIL021W	SOG2	Q08817	791 aa		4.77	□□□□□ -1.65
RPB3	YIL021W	SUI2	P20459	304 aa	Known RBP	4.76	□□□□□ -1.65
RPB3	YIL021W	RAD55	P38953	406 aa		4.76	□□□□□ -1.65
RPB3	YIL021W	DNF3	Q12674	1656 aa		4.76	□□□□□ -1.65
RPB3	YIL021W	KRE5	P22023	1365 aa		4.76	□□□□□ -1.65
RPB3	YIL021W	PSK1	P31374	1356 aa		4.76	□□□□□ -1.65
RPB3	YIL021W	FUR4	P05316	633 aa	Known RBP	4.75	□□□□□ -1.65
RPB3	YIL021W	HVG1	P0CE11	249 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms